Circularization restores signal recognition particle RNA functionality in Thermoproteus

  1. André Plagens
  2. Michael Daume
  3. Julia Wiegel
  4. Lennart Randau  Is a corresponding author
  1. Max Planck Institute for Terrestrial Microbiology, Germany

Abstract

Signal recognition particles (SRPs) are universal ribonucleoprotein complexes found in all three domains of life that direct the cellular traffic and secretion of proteins. These complexes consist of SRP proteins and a single, highly structured SRP RNA. Canonical SRP RNA genes have not been identified for some Thermoproteus species even though they contain SRP19 and SRP54 proteins. Here, we show that genome rearrangement events in Thermoproteus tenax created a permuted SRP RNA gene. The 5'- and 3'-termini of this SRP RNA are located close to a functionally important loop present in all known SRP RNAs. RNA-Seq analyses revealed that these termini are ligated together to generate circular SRP RNA molecules that can bind to SRP19 and SRP54. The circularization site is processed by the tRNA splicing endonuclease. This moonlighting activity of the tRNA splicing machinery permits the permutation of the SRP RNA and creates highly stable and functional circular RNA molecules.

Article and author information

Author details

  1. André Plagens

    Max Planck Research Group, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
    Competing interests
    The authors declare that no competing interests exist.
  2. Michael Daume

    Max Planck Research Group Prokaryotic Small RNA Biology"", Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
    Competing interests
    The authors declare that no competing interests exist.
  3. Julia Wiegel

    Max Planck Research Group Prokaryotic Small RNA Biology"", Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
    Competing interests
    The authors declare that no competing interests exist.
  4. Lennart Randau

    Max Planck Research Group "Prokaryotic Small RNA Biology", Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
    For correspondence
    lennart.randau@mpi-marburg.mpg.de
    Competing interests
    The authors declare that no competing interests exist.

Reviewing Editor

  1. Gisela Storz, National Institute of Child Health and Human Development, United States

Version history

  1. Received: September 15, 2015
  2. Accepted: October 23, 2015
  3. Accepted Manuscript published: October 24, 2015 (version 1)
  4. Version of Record published: December 23, 2015 (version 2)

Copyright

© 2015, Plagens et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

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  1. André Plagens
  2. Michael Daume
  3. Julia Wiegel
  4. Lennart Randau
(2015)
Circularization restores signal recognition particle RNA functionality in Thermoproteus
eLife 4:e11623.
https://doi.org/10.7554/eLife.11623

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https://doi.org/10.7554/eLife.11623

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