Edited by
Satyajit Rath et al.

Focus Issue: Trained Immunity

Our latest Focus Issue looks at what we’ve learnt over the past decade and what’s next for the field of trained immunity.
Collection
Vivid Biology. CC-BY-NC 4.0

Immunological memory research has previously referred only to the adaptive immune system and its responses to pathological triggers. This was challenged, however, by a study in innate immune memory, also known as trained immunity, in human and mouse experimental systems. Since then, many studies have built on those findings and proved that innate immune cells and structural cells can develop a non-specific memory state.

There are still, however, many questions to answer about the fundamental and clinical mechanisms of establishing innate immune memory, its risks and how it can be used to improve health.

Curating Review Articles and original research into this area, this Focus Issue looks at the history, current state and future of innate immune memory studies, and provides a critical assessment of this field of research.

This Focus Issue was overseen by eLife Senior Editors Satyajit Rath, Carla Rothlin and Tadatsugu Taniguchi.

The editors have put together an Editorial that talks more about trained immunity, its history and future potential in leading the next breakthrough in medicine.

We hope this Focus Issue sparks new discussions and opens new fields of knowledge that lead to potential therapeutic interventions.

Collection

    1. Immunology and Inflammation
    2. Microbiology and Infectious Disease

    Focus Issue: Evolving our understanding of trained immunity

    Eva Kaufmann, Yahya Sohrabi ... Jos WM van der Meer
    The articles in this focus issue discuss progress towards a more complete understanding of memory in the innate immune system, and efforts to exploit "trained immunity" for the development of new vaccines and therapeutics.
    1. Immunology and Inflammation

    Coevolutionary interplay: Helminths-trained immunity and its impact on the rise of inflammatory diseases

    Eugenio Antonio Carrera Silva, Juliana Puyssegur, Andrea Emilse Errasti
    Deciphering the gut biome's, including helminths', influence on human trained immunity will unlock novel immunotherapies harnessing the immune reprogramming potential of their secreted factors and extracellular vesicles.
    1. Immunology and Inflammation

    Trained immunity: A new player in cancer immunotherapy

    Shu Li, Yi Zou ... Jun Yan
    Trained immunity is a form of innate immune cell memory that is being developed as a novel immunotherapeutic approach for cancer treatment.
    1. Evolutionary Biology
    2. Immunology and Inflammation

    Current insights into insect immune memory

    Gabriela Krejčová, Adam Bajgar
    Insects possess a remarkable ability to develop innate immune memory, and the mechanisms underlying this process are becoming a central topic in innate immunity research.
    1. Immunology and Inflammation

    Bioengineering approaches to trained immunity: Physiologic targets and therapeutic strategies

    Hannah Riley Knight, Marie Kim ... Aaron Esser-Kahn
    Current approaches in bioengineering are synthesized and methods for their implementation are suggested for the induction and modulation of trained immunity in the treatment of human diseases.
    1. Immunology and Inflammation

    A dual nature of γδ T cell immune memory responses

    Tsz Kin Suen, Burcu Al ... Katarzyna Placek
    Both adaptive and innate immune memory responses have been described in gamma delta T cells, yet the mechanisms, the ligands and the gamma delta T cell subsets generating memory responses have remain to be explored.
    1. Immunology and Inflammation
    2. Microbiology and Infectious Disease

    Trained immunity in the lung

    Elina Idiiatullina, Dane Parker
    Several studies have now demonstrated that trained immunity occurs in the airways to several pathogens and products, while its utility is yet to be determined.
    1. Immunology and Inflammation

    Toll-like receptors (TLRs) in the trained immunity era

    Lena Alexopoulou, Magali Irla
    Toll-like receptors (TLRs) shape trained immunity, balancing infection responses and chronic inflammation, and TLR agonists are promising immunomodulators for infectious diseases and cancer.
    1. Immunology and Inflammation

    Hematopoietic stem and progenitor cells as a reservoir for trained immunity

    Brandon T Tran, Vidthiya Jeyanathan ... Katherine Y King
    Inflammation supports selection, differentiation bias, and epigenetic reprogramming of hematopoietic stem and progenitor cells to generate innate immune memory.
    1. Immunology and Inflammation
    2. Microbiology and Infectious Disease

    Innate immunity and training to subvert original antigenic sin by the humoral immune response

    Faez Amokrane Nait Mohamed, Daniel Lingwood
    It is proposed that innate immune cells are positioned to activate the naïve B cell repertoire and rational application of training stimuli could enforce this, offsetting original antigenic sin, wherein recall of ‘off-target’ B cell memory can obscure vaccine effectiveness.
    1. Immunology and Inflammation

    Trained immunity in skin infections: Macrophages and beyond

    Vitka Gres, Merve Göcer ... Philipp Henneke
    Review of the emerging understanding of trained immunity in the skin and how infection-driven cellular processes induce long-lasting immune adaptation and modulate skin barrier integrity.
    1. Immunology and Inflammation

    Metabolic regulation of immune memory and function of microglia

    Nikolaos Nirakis, Sofia Dimothyra ... Vasileia Ismini Alexaki
    Cell metabolic processes, particularly glucose, glutamine, and lipid metabolism, orchestrate inflammatory responses and promote epigenetic changes shaping microglia immune memory.
    1. Immunology and Inflammation

    Resident memory macrophages and trained innate immunity at barrier tissues

    Alisha Kang, Michael D'Agostino ... Zhou Xing
    The increasing knowledge of barrier tissue-resident memory macrophages and trained innate immunity (TII) will help develop both nontarget-specific and target-specific TII-based vaccine strategies.
    1. Genetics and Genomics

    Rewiring the bone marrow: Evolution and the transcriptional architecture of trained immunity

    Sarah J Sun, Raúl Aguirre-Gamboa, Luis B Barreiro
    Hematopoietic reprogramming reflects the selective and evolutionarily conserved engagement of transcription factor networks that encode innate immune memory in long-lived stem cells.
    1. Immunology and Inflammation

    Early and delayed STAT1-dependent responses drive local trained immunity of macrophages in the spleen

    Aryeh Solomon, Noa Bossel Ben-Moshe ... Roi Avraham
    In vivo perturbations and single-cell RNA-seq reveal cell-type-specific STAT1-IFNg signaling in regulation of trained immunity in tissue-resident immune cells.
    1. Immunology and Inflammation

    Uremic toxin indoxyl sulfate induces trained immunity via the AhR-dependent arachidonic acid pathway in end-stage renal disease (ESRD)

    Hee Young Kim, Yeon Jun Kang ... Won-Woo Lee
    Indoxyl sulfate, a key uremic toxin in chronic kidney disease (CKD), induces trained immunity in monocytes via crosstalk between aryl hydrocarbon receptor (AhR)-dependent epigenetic reprogramming by enhancement of the arachidonic acid pathway and AhR-independent metabolic rewiring.
    1. Immunology and Inflammation

    β-Glucan reprograms alveolar macrophages via neutrophil/IFNγ axis in a murine model of lung injury

    Renaud Prevel, Erwan Pernet ... Maziar Divangahi
    β-Glucan-mediated trained immunity activates alveolar macrophages which exacerbates acute lung injury induced by LPS.
    1. Cell Biology
    2. Immunology and Inflammation

    The Human Mitochondrial Genome Encodes for an Interferon-Responsive Host Defense Peptide

    Michelle C Rice, Maria Imun ... Changhan Lee
    Revised
    Reviewed Preprint v2
    Updated
    • Valuable
    • Solid
    1. Immunology and Inflammation

    Aurora kinase A promotes trained immunity via regulation of endogenous S-adenosylmethionine metabolism

    Mengyun Li, Huan Jin ... Xiaojun Xia
    The kinase activity of Aurora kinase A is required for preserving S-adenosylmethionine availability for histone methylation and epigenetic reprogramming during trained immunity induction in macrophages.
    1. Cell Biology
    2. Immunology and Inflammation

    β-glucan reprograms macrophages to attenuate efferocytosis of cancer cells

    Alexandros Chatzis, Jakub Lukaszonek ... Ioannis Kourtzelis
    Revised
    Reviewed Preprint v2
    Updated
    • Important
    • Convincing
    1. Immunology and Inflammation
    2. Stem Cells and Regenerative Medicine

    IL-27 limits HSPC differentiation during infection and protects from stem cell exhaustion

    Daniel L Aldridge, Zachary Lanzar ... Christopher A Hunter
    Revised
    Reviewed Preprint v2
    Updated
    • Important
    • Solid
    1. Immunology and Inflammation

    Coenzyme A governs proinflammatory macrophage metabolism

    Greg. A Timblin, Kevin. M Tharp ... Valerie M Weaver
    Not revised
    Reviewed Preprint v1
    • Important
    • Compelling
    1. Immunology and Inflammation

    Beta-Glucan Modulates Monocyte Plasticity and Differentiation Capacity to Mitigate DSS-Induced Colitis

    Yinyin Lv, Yanyun Fan ... Hongzhi Xu
    Not revised
    Reviewed Preprint v1
    • Valuable
    • Compelling
    • Convincing

Related

Contributors

  1. Satyajit Rath
    Senior Editor
  2. Tadatsugu Taniguchi
    Tadatsugu Taniguchi
    Senior Editor
  3. Jorge Dominguez-Andres
    Guest Editor
  4. Eva Kaufmann
    Guest Editor
  5. Boris Novakovic
    Guest Editor
  6. Yahya Sohrabi
    Guest Editor
  7. Jos van der Meer
    Guest Editor