Figure 6—figure supplement 2. | Epigenomic landscapes of retinal rods and cones

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Epigenomic landscapes of retinal rods and cones

Figure 6—figure supplement 2.

Affiliation details

Johns Hopkins University School of Medicine, United States; The Salk Institute for Biological Studies, United States; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, United States; Janelia Research Campus, Howard Hughes Medical Institute, United States; University of California San Diego, United States; The University of Western Australia, Australia; Johns Hopkins University, United States
Figure 6—figure supplement 2.
Download figureOpen in new tabFigure 6—figure supplement 2. CG DNA methylation around rod-specific genes.

Line plots showing CG DNA methylation levels in a region between -5 kb and +20 kb around the TSS of rod-specific genes. Biological replicates are shown as separate lines. Hypo-DMRs are indicated with black lines. R, WT rods; C, cones; rd7, rd7 rods. The gene body is indicated with a red line. Barplots showing RNA abundances. All genes are differentially expressed between WT rods and cones and between WT retina and Nrl KO retina. Asterisks indicate differentially expressed genes between rd7 rods and WT rods or between rd7 rods and cones.

DOI: http://dx.doi.org/10.7554/eLife.11613.020