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Page 3 of 483
    1. Chromosomes and Gene Expression

    Epigenetic reprogramming by TET enzymes impacts co-transcriptional R-loops

    João C Sabino, Madalena R de Almeida ... Sérgio Fernandes de Almeida
    The deposition of 5-hydroxymethylcytosine epigenetic marks in active genes promotes the annealing of the nascent RNA to the template DNA strand, forming an R-loop.
    1. Biochemistry and Chemical Biology

    The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation

    Tyler B Faust, Yang Li ... Alan D Frankel
    The HIV-1 Tat protein hijacks host non-degradative ubiquitination to trigger the nuclear import of the transcription elongation factor, P-TEFb.
    1. Genetics and Genomics
    2. Microbiology and Infectious Disease

    Aminoglycoside tolerance in Vibrio cholerae engages translational reprogramming associated with queuosine tRNA modification

    Louna Fruchard, Anamaria Babosan ... Zeynep Baharoglu
    tRNA Q34 modification impacts tyrosine codon decoding and leads to proteome reprogramming in response to antibiotic stress in Vibrio cholerae.
    1. Chromosomes and Gene Expression
    2. Immunology and Inflammation

    Tet2 and Tet3 cooperate with B-lineage transcription factors to regulate DNA modification and chromatin accessibility

    Chan-Wang Lio, Jiayuan Zhang ... Anjana Rao
    TET methylcytosine oxidases cooperate with B lineage-specific transcription factors to promote immunoglobulin gene rearrangement by depositing 5hmC, facilitating DNA demethylation and increasing chromatin accessibility at enhancers.
    1. Immunology and Inflammation

    Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities

    Magdalena L Russell, Aisha Souquette ... Philip Bradley
    Trans genetic variation in TdT and Artemis loci impacts V(D)J recombination probabilities.
    1. Genetics and Genomics
    2. Neuroscience

    5-Hydroxymethylcytosine-mediated active demethylation is required for mammalian neuronal differentiation and function

    Elitsa Stoyanova, Michael Riad ... Nathaniel Heintz
    5-Hydroxymethylcytosine-mediated active DNA demethylation occurs in postmitotic neurons, and is required for their terminal differentiation and function.
    1. Biochemistry and Chemical Biology

    Dithiothreitol causes toxicity in C. elegans by modulating the methionine–homocysteine cycle

    Gokul G, Jogender Singh
    The redox reagent dithiothreitol causes toxicity by depleting S-adenosylmethionine levels, and dietary vitamin B12 could alleviate this toxicity via the methionine synthase enzyme.
    1. Cancer Biology
    2. Immunology and Inflammation

    Osterix-Cre marks distinct subsets of CD45- and CD45+ stromal populations in extra-skeletal tumors with pro-tumorigenic characteristics

    Biancamaria Ricci, Eric Tycksen ... Roberta Faccio
    Osterix, a transcription factor regulating osteoblast differentiation and bone formation, is expressed in subsets of CAFs with osteogenic features and marks tumor infiltrating immune populations enriched in immune suppressive markers.
    1. Structural Biology and Molecular Biophysics
    2. Cell Biology

    A near atomic structure of the active human apoptosome

    Tat Cheung Cheng, Chuan Hong ... Christopher W Akey
    A cryo-electron microscopy model of the active human apoptosome illuminates how this "wheel of death" binds the protease procaspase-9 to initiate programmed cell death.
    1. Developmental Biology
    2. Neuroscience

    Pum2 and TDP-43 refine area-specific cytoarchitecture post-mitotically and modulate translation of Sox5, Bcl11b, and Rorb mRNAs in developing mouse neocortex

    Kawssar Harb, Melanie Richter ... Kent Duncan
    RNA-binding proteins use both translational activation and repression of key molecular determinants to post-mitotically sculpt the identity and connectivity of developing mouse neocortex in an area-specific manner.