39 results found
    1. Biochemistry and Chemical Biology
    2. Genetics and Genomics

    Activity-based CRISPR scanning uncovers allostery in DNA methylation maintenance machinery

    Kevin Chun-Ho Ngan, Samuel M Hoenig ... Brian B Liau
    Activity-based inhibitors, in conjunction with new experimental and computational tools, enable the discovery of mechanisms involved in DNMT1 autoinhibition.
    1. Chromosomes and Gene Expression

    Nonsense mRNA suppression via nonstop decay

    Joshua A Arribere, Andrew Z Fire
    Nonstop mRNA decay degrades mRNAs with a premature stop codon after such mRNAs are targeted by the nonsense-mediated decay machinery.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    Concurrent remodelling of nucleolar 60S subunit precursors by the Rea1 ATPase and Spb4 RNA helicase

    Valentin Mitterer, Matthias Thoms ... Roland Beckmann
    The RNA helicase Spb4 restructures rRNA helices H62/H63 and primes pre-ribosomal 60S intermediates for large-scale remodelling by the AAA-ATPase Rea1.
    1. Biochemistry and Chemical Biology

    The intrinsically disordered N-terminus of SUMO1 is an intramolecular inhibitor of SUMO1 interactions

    Sebastian M Richter, Fan Jin ... Frauke Melchior
    Revised
    Reviewed Preprint v2
    Updated
    • Important
    • Convincing
    1. Genetics and Genomics
    2. Medicine

    Allelic strengths of encephalopathy-associated UBA5 variants correlate between in vivo and in vitro assays

    Xueyang Pan, Albert N Alvarez ... Hugo J Bellen
    A comprehensive platform is established for the evaluation of both current and future individuals afflicted with the UBA5-associated developmental and epileptic encephalopathy.
    1. Biochemistry and Chemical Biology

    Bacterial OTU deubiquitinases regulate substrate ubiquitination upon Legionella infection

    Donghyuk Shin, Anshu Bhattacharya ... Ivan Dikic
    A novel class of bacterial OTU deubiquitinases provides insights on the distinct roles of bacterial deubiquitinases in host–pathogen interactions.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    Mechanism of ubiquitin ligation and lysine prioritization by a HECT E3

    Hari B Kamadurai, Yu Qiu ... Brenda A Schulman
    Structural studies reveal the mechanism by which a HECT E3 ubiquitin ligase carries out E2-to-E3-to-substrate ubiquitin transfer and prioritizes target lysines for ubiquitination.
    1. Chromosomes and Gene Expression

    RYBP stimulates PRC1 to shape chromatin-based communication between Polycomb repressive complexes

    Nathan R Rose, Hamish W King ... Robert J Klose
    The E3 ubiquitin ligase activity of polycomb repressive complex 1 is stimulated by RYBP to support a histone modification-dependent communication between polycomb repressive complexes in mice.
    1. Computational and Systems Biology
    2. Immunology and Inflammation

    Bacterial death and TRADD-N domains help define novel apoptosis and immunity mechanisms shared by prokaryotes and metazoans

    Gurmeet Kaur, Lakshminarayan M Iyer ... L Aravind
    Prokaryotic TRADD-N and Death-like adaptor domains in diverse predicted apoptosis and immune systems from multicellular prokaryotes and metazoans indicate the common origin of key apoptosis mechanisms required for the stabilization of multicellularity.
    1. Cell Biology

    Atg1 kinase in fission yeast is activated by Atg11-mediated dimerization and cis-autophosphorylation

    Zhao-Qian Pan, Guang-Can Shao ... Li-Lin Du
    A mechanistic dissection of how autophagy kinase Atg1 is activated in fission yeast reveals surprising differences from the known Atg1 activation mechanisms previously defined in budding yeast.

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