1,313 results found
    1. Structural Biology and Molecular Biophysics

    Decoupling of the onset of anharmonicity between a protein and its surface water around 200 K

    Lirong Zheng, Bingxin Zhou ... Liang Hong
    The dynamical transition between a protein and its surface water is decoupled.
    Version of Record
    Short Report
    • Important
    • Convincing
    1. Chromosomes and Gene Expression
    2. Structural Biology and Molecular Biophysics

    OpenNucleome for high-resolution nuclear structural and dynamical modeling

    Zhuohan Lao, Kartik D Kamat ... Bin Zhang
    An open-source tool for computational simulations of the human genome has been introduced, enabling the characterization of complex nuclear environments and the interpretation of experimental observations.
    1. Chromosomes and Gene Expression

    Monoubiquitination by the human Fanconi anemia core complex clamps FANCI:FANCD2 on DNA in filamentous arrays

    Winnie Tan, Sylvie van Twest ... Andrew J Deans
    Biochemical reconstitution experiments uncover the ubiquitin-mediated function of a DNA repair protein, key to the understanding of Fanconi Anemia, a cancer-associated bone marrow failure syndrome.
    1. Structural Biology and Molecular Biophysics

    Sequence co-evolution gives 3D contacts and structures of protein complexes

    Thomas A Hopf, Charlotta P I Schärfe ... Debora S Marks
    Interactions in protein complexes can be predicted from evolutionary information from genomic sequences.
    1. Biochemistry and Chemical Biology
    2. Physics of Living Systems

    Mechanically transduced immunosorbent assay to measure protein-protein interactions

    Christopher J Petell, Kathyrn Randene ... Joshua P Steimel
    METRIS is a method that reports a mechanical readout of protein-protein interactions and due to its unique properties, it will allow many protein-protein interactions to be quantitatively measured easily that are currently laborious to measure with conventional methods.
    1. Biochemistry and Chemical Biology

    Chemical structure-guided design of dynapyrazoles, cell-permeable dynein inhibitors with a unique mode of action

    Jonathan B Steinman, Cristina C Santarossa ... Tarun M Kapoor
    Analyses of the chemical structure of ciliobrevins led to dynein inhibitors with improved properties and higher potency.
    1. Neuroscience

    Importance of glutamine in synaptic vesicles revealed by functional studies of SLC6A17 and its mutations pathogenic for intellectual disability

    Xiaobo Jia, Jiemin Zhu ... Yi Rao
    Physiological studies of SLC6A17 and its pathogenic mutations revealed that glutamine is transported into synaptic vesicles (SVs) in an SLC6A17-dependent manner and all pathogenic conditions reduced glutamine level in SVs.
    1. Biochemistry and Chemical Biology
    2. Evolutionary Biology

    Nitrogenase resurrection and the evolution of a singular enzymatic mechanism

    Amanda K Garcia, Derek F Harris ... Betül Kaçar
    Life is constrained in its sampling of protein sequence space to catalyze one of the most energetically challenging biochemical reactions.
    1. Computational and Systems Biology
    2. Evolutionary Biology

    ASPEN, a methodology for reconstructing protein evolution with improved accuracy using ensemble models

    Roman Sloutsky, Kristen M Naegle
    Using different sets of input sequences to evolutionary reconstruction algorithms results in the exploration of many possible models, the intergration over which produces significantly more accurate models.

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