800 results found
    1. Structural Biology and Molecular Biophysics

    Discovery and characterization of Hv1-type proton channels in reef-building corals

    Gisela Rangel-Yescas, Cecilia Cervantes ... Leon D Islas
    Proton channels are present in reef-building corals and constitute important molecular players that should help understand calcification and the response of these organisms to ocean acidification.
    1. Structural Biology and Molecular Biophysics

    Structural dynamics determine voltage and pH gating in human voltage-gated proton channel

    Shuo Han, Sophia Peng ... Shizhen Wang
    Visualization of the real-time conformational transitions of the human voltage-gated proton channel hHv1 provided novel insights into how voltage and pH gradients modify the dynamic behaviors of channel structures to control proton flow across membrane.
    1. Structural Biology and Molecular Biophysics

    Structural and functional characterization of an otopetrin family proton channel

    Qingfeng Chen, Weizhong Zeng ... Youxing Jiang
    Structural and functional analysis of the OTOP3 channel from Xenopus tropicalis offers insights into the mechanism of ion transport and regulation in the otopetrin proton channel family.
    1. Structural Biology and Molecular Biophysics

    Zinc activation of OTOP proton channels identifies structural elements of the gating apparatus

    Bochuan Teng, Joshua P Kaplan ... Emily R Liman
    Members of the OTOP family of proton-selective ion channels, which includes the sour receptor OTOP1, are differentially sensitive to activation by zinc, which interacts with residues on tm 5-6 and 11-12 linkers that form part of the channel gating apparatus.
    1. Neuroscience
    2. Structural Biology and Molecular Biophysics

    Structural motifs for subtype-specific pH-sensitive gating of vertebrate otopetrin proton channels

    Bochuan Teng, Joshua P Kaplan ... Emily R Liman
    The sour receptor, OTOP1, and related proton channel OTOP3 are steeply activated by extracellular protons while OTOP2 is active over a broad pH range and differences in gating are partly attributed to extracellular domains.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    pH- and sodium-induced changes in a sodium/proton antiporter

    Cristina Paulino, Werner Kühlbrandt
    Sodium ions but not protons induce defined helix movements in a sodium/proton antiporter and suggest a mechanism for Na + binding and transport.
    1. Computational and Systems Biology
    2. Structural Biology and Molecular Biophysics

    Markov state models of proton- and pore-dependent activation in a pentameric ligand-gated ion channel

    Cathrine Bergh, Stephanie A Heusser ... Erik Lindahl
    Computational models of gating processes in an ion channel show how stability shifts upon ligand-binding and mutations are reproduced, which highlights mechanistic details and proposes a new role for symmetry in gating.
    1. Structural Biology and Molecular Biophysics

    Molecular mechanism underlying desensitization of the proton-activated chloride channel PAC

    James Osei-Owusu, Zheng Ruan ... Zhaozhu Qiu
    A new mechanism of receptor desensitization is revealed for the novel proton-activated chloride channel, which plays an important role in physiology and disease associated with acidic pH.
    1. Structural Biology and Molecular Biophysics

    Membrane curvature sensing and symmetry breaking of the M2 proton channel from Influenza A

    James Lincoff, Cole VM Helsell ... Michael Grabe
    Using a combination of all-atom molecular simulation and continuum membrane mechanics, M2 channels from influenza are shown to be stabilized in negative Gaussian curvature regions, such as the neck of budding viral particles, only in C2-symmetric conformations.
    1. Structural Biology and Molecular Biophysics

    Activation-pathway transitions in human voltage-gated proton channels revealed by a non-canonical fluorescent amino acid

    Esteban Suárez-Delgado, Maru Orozco-Contreras ... Leon D Islas
    Combined patch-clamp fluorometry with ANAP, a fluorescent non-canonical amino acid, uncovers transitions in the activation pathway of human HV1 that are modulated by voltage and the pH gradient.

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