2,950 results found
    1. Computational and Systems Biology
    2. Microbiology and Infectious Disease

    Phenotype inference in an Escherichia coli strain panel

    Marco Galardini, Alexandra Koumoutsi ... Pedro Beltrao
    The mechanistic impact of genetic variants can be combined with previous knowledge on gene function to deliver conditional growth predictions and pave the way for personalized genetic interventions.
    1. Genetics and Genomics

    The multi-tissue landscape of somatic mtDNA mutations indicates tissue-specific accumulation and removal in aging

    Monica Sanchez-Contreras, Mariya T Sweetwyne ... Scott R Kennedy
    The accumulation of somatic mutations during aging is not uniform across tissue types and, in addition, shows significant variability in the source of mutation that can be modified by small molecule interventions.
    1. Computational and Systems Biology
    2. Structural Biology and Molecular Biophysics

    Rapid protein stability prediction using deep learning representations

    Lasse M Blaabjerg, Maher M Kassem ... Kresten Lindorff-Larsen
    RaSP is a method for making rapid and accurate predictions of changes in protein stability that enabled us to calculate ~300 million stability changes for nearly all possible single amino acid changes in the human proteome.
    1. Evolutionary Biology
    2. Microbiology and Infectious Disease

    A computational method for predicting the most likely evolutionary trajectories in the stepwise accumulation of resistance mutations

    Ruth Charlotte Eccleston, Emilia Manko ... Nicholas Furnham
    A computational method for predicting evolutionary pathways to antimicrobial resistance, accounting for how epistatic interactions determine trajectories, is described.
    1. Genetics and Genomics
    2. Structural Biology and Molecular Biophysics

    Determinants of trafficking, conduction, and disease within a K+ channel revealed through multiparametric deep mutational scanning

    Willow Coyote-Maestas, David Nedrud ... Daniel Schmidt
    By measuring the impacts of thousands of mutations on potassium channel trafficking and function, we illuminate the molecular basis of folding, structure–function relationships, and how these are altered in disease.
    1. Genetics and Genomics
    2. Structural Biology and Molecular Biophysics

    Mutational Scanning: Ion-ing out the genetic variants of Kir2.1

    Braden S Fallon, Justin G English
    Deep mutational scanning provides new insights into how mutations alter the expression and activity of the potassium ion channel Kir2.1, which is associated with many diseases.
    Version of Record
    Insight
    1. Genetics and Genomics

    Genomics of 1 million parent lifespans implicates novel pathways and common diseases and distinguishes survival chances

    Paul RHJ Timmers, Ninon Mounier ... Peter K Joshi
    Genomic associations with lifespan principally reflect heart disease/smoking/dementia but not other cancers, and distinguish lifespan differences of five years between top/bottom deciles of a score derived from DNA alone.
    1. Epidemiology and Global Health

    Estimating the burden of α-thalassaemia in Thailand using a comprehensive prevalence database for Southeast Asia

    Carinna Hockham, Supachai Ekwattanakit ... Frédéric B Piel
    The incorporation of as yet underused local epidemiological data on α-thalassaemia in Southeast Asia within a geostatistical model suggests that the burden of severe α-thalassaemia forms may have been underestimated.
    1. Microbiology and Infectious Disease

    Quantifying the relationship between SARS-CoV-2 viral load and infectiousness

    Aurélien Marc, Marion Kerioui ... Jeremie Guedj
    Viral dynamic modeling reveals the relationship between SARS-CoV-2 viral load and infectiousness and allows to anticipate the effects of variants of concern and of vaccination on transmission.
    1. Biochemistry and Chemical Biology
    2. Immunology and Inflammation

    Rasgrp1 mutation increases naïve T-cell CD44 expression and drives mTOR-dependent accumulation of Helios+ T cells and autoantibodies

    Stephen R Daley, Kristen M Coakley ... Jeroen P Roose
    A single point mutation in a Ras activator leads to aberrant constitutive mTOR signaling in peripheral T cells that consequently accumulate as abnormal T helper cells and stimulate the production of autoantibodies by B cells.

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