Examples of differentially expressed genes after the manipulation experiment.
Results of (a) Os12g0504050, (b) Os01g0642200, (c) Os08g0162800, (d) Os11g0184900, (e) Os03g0285700, and (f) Os01g0678500 are presented. y-axis represents DESeq2-normalized read counts. Gray, red, and blue indicate CT (control), GN (Globisporangium nunn added), and CK (Chironomus kiiensis removed) treatments, respectively. The gene expressions of the GN treatment in all six genes are statistically clearly different from those of the other two treatments (P < 0.0001) except for the panel GN vs. CK in c (P = 0.00014) and GN vs. CK in d (P = 0.0087).