Transcriptional immune suppression and upregulation of double stranded DNA damage and repair repertoires in ecDNA-containing tumors

Bioinformatics and Systems Biology Graduate Program, University of California at San Diego, La Jolla, CA, USA
Department of Biomedical Systems Informatics and Brain Korea 21 PLUS Project for Medical Science, Yonsei University College of Medicine, Seoul, South Korea
Department of Computer Science and Engineering, University of California at San Diego, La Jolla, CA, USA
Center for Personal Dynamic Regulomes, Stanford University, Stanford, CA, USA
Department of Genetics, Stanford University, Stanford, CA, USA
Howard Hughes Medical Institute, Stanford University, Stanford, CA, USA
Children’s Medical Center Research Institute, University of Texas Southwestern Medical Center, Dallas, TX, USA
Sarafan Chemistry, Engineering, and Medicine for Human Health (Sarafan ChEM-H), Stanford University, Stanford, CA, USA
Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA
Halıcıoğlu Data Science Institute, University of California at San Diego, La Jolla, CA, USA