mEPSC amplitudes and GluA2 receptor cluster sizes did not always change in parallel after treatment with TTX in cultures from Rab3A+/+ and Rab3A-/- mice. A) Rab3A+/+ Culture #1: mEPSC amplitudes and GluA2 receptor cluster sizes increased in parallel after treatment in TTX. i) CDFs of mEPSC amplitudes of cells from untreated and TTX treated dishes were significantly different (KS test, D = 0.16, p = 0.010; CON, n = 180, TTX, n = 210). ii) CDFs of GluA2 receptor cluster sizes of dendrites from untreated and TTX treated dishes were significantly different (KS test, D = 0.17, p = 3.79 * 10-4; CON, n = 300, TTX, n = 300). iii) 35 mEPSC amplitude quantiles from each of 6 untreated cells and 30 quantiles from each of 7 TTX-treated cells were sorted from smallest to largest and used to calculate the ratio of TTX mEPSC amplitude/CON mEPSC amplitude, which was plotted vs. CON mEPSC amplitude. iv) 30 GluA2 receptor cluster size quantiles from each of 10 untreated dendrites and 30 GluA2 receptor cluster size quantiles from each of 10 TTX-treated dendrites were used to calculate the ratio of TTX GluA2 cluster size/CON GluA2 cluster size, and plotted vs. CON GluA2 cluster size. Inset, full range of data. B) Rab3A+/+ Culture #2: mEPSC amplitudes and GluA2 receptor cluster sizes increased in parallel after treatment in TTX. i) CDFs of mEPSC amplitudes of cells from untreated and TTX treated dishes were significantly different (KS test, D = 0.21, p = 1.06 * 10-4; CON, n = 210, TTX, n = 240). ii) CDFs of GluA2 receptor cluster sizes of dendrites from untreated and TTX treated dishes were significantly different (KS test, D = 0.21, p = 5.39 * 10-6; CON, n = 270, TTX, n = 300). iii) 32 mEPSC amplitude quantiles from each of 7 untreated cells, and 28 mEPSC amplitude quantiles from each of 8 TTX treated cells were sorted from smallest to largest and were used to calculate the ratio of TTX mEPSC amplitude/CON mEPSC amplitude, and plotted vs. CON mEPSC amplitude. iv) 30 GluA2 receptor cluster size quantiles from each of 9 untreated dendrites and 27 GluA2 receptor cluster size quantiles from each of 10 TTX-treated dendrites were sorted from smallest to largest and used to calculate the ratio of TTX GluA2 cluster/CON GluA2 cluster size, and plotted vs. CON GluA2 cluster size. Inset, full range of data. C) Rab3A+/+ Culture #3: mEPSC amplitudes increased, but GluA2 receptor cluster sizes decreased, after treatment in TTX. i) CDFs of mEPSC amplitudes of cells from untreated and TTX treated dishes were significantly different (KS test, D = 0.15, p = 0.002; CON, n = 300, TTX, n = 270). ii) CDFs of GluA2 receptor cluster sizes of dendrites from untreated and TTX treated dishes were significantly different, but the TTX CDF is shifted to the left (KS test, D = 0.16, p = 0.001; CON, n = 300, TTX, n = 270) iii) 27 mEPSC amplitude quantiles from each of 10 untreated cells, and 30 mEPSC amplitude quantiles from each of 9 TTX-treated cells, were sorted from smallest to largest, used to calculate the ratio of TTX mEPSC amplitude/ CON mEPSC amplitude, and plotted vs. CON mEPSC amplitude. iv) 27 GluA2 receptor cluster size quantiles from each of 10 untreated dendrites and 30 GluA2 receptor cluster sizes from each of 9 TTX-treated dendrites were sorted from smallest to largest, used to calculate the ratio of TTX GluA2 receptor cluster size/CON GluA2 receptor cluster size, and plotted vs. CON GluA2 receptor cluster size. D) Rab3A-/- Culture #1 (note, this culture is distinct from that of Rab3A+/+ Culture #1). Neither mEPSC amplitudes, nor GluA2 receptor cluster size, increased following TTX treatment. i) CDFs of mEPSC amplitudes of cells from untreated and TTX-treated cultures were not significantly different (KS test, D = 0.05, p = 0.90; CON, n = 210, TTX, n = 180). ii) CDFs of GluA2 receptor cluster sizes of dendrites from untreated and TTX (Figure 8 continued) treated dishes were not significantly different, although the TTX CDF is shifted slightly to the left (KS test, D = 0.10, p = 0.08; CON, n = 300, TTX, n = 300). iii) 30 mEPSC amplitude quantiles from each of 7 untreated cells and 35 mEPSC quantiles from each of 6 TTX-treated cells were sorted from smallest to largest, used to calculate the ratio TTX mEPSC amplitude/CON mEPSC amplitude, and plotted vs. CON mEPSC amplitude. iv) 30 GluA2 receptor cluster size quantiles from each of 10 untreated dendrites and 10 TTX-treated dendrites were sorted from smallest to largest, used to calculate the ratio TTX cluster size/CON cluster size, and plotted vs. CON cluster size. E) Rab3A-/- Culture #2 (distinct from Rab3A+/+ Culture #2) mEPSC amplitudes and GluA2 receptor cluster sizes decreased after TTX treatment. i) TTX mEPSC amplitudes CDF is shifted slightly to the left compared to the CON mEPSC amplitudes CDF but the difference is not significant (KS test, D = 0.08, p = 0.28, CON, n = 240, TTX, n = 240). ii) TTX GluA2 receptor cluster sizes CDF is significantly shifted to the left compared to CON GluA2 receptor cluster sizes CDF (KS test, D = 0.13, p = 0.01; CON, n = 300, TTX, n = 300). iii) 24 mEPSC amplitude quantiles from each of 8 untreated cells and 8 TTX- treated cells were sorted from smallest to largest, used to calculate the ratio TTX mEPSC amplitude/CON mEPSC amplitude, and plotted vs. CON mEPSC amplitude. iv) 27 GluA2 receptor cluster size quantiles from each of 10 untreated dendrites, and 30 GluA2 receptor cluster size quantiles from each of 9 TTX treated dendrites, were sorted from smallest to largest, used to calculate the ratio TTX GluA2 cluster size/CON cluster size, and plotted vs. CON cluster size. Both mEPSC amplitude and GluA2 receptor cluster size ratios were below 1 across the majority of data. F) Rab3A-/- Culture #3 (distinct from Rab3A+/+ Culture #3). mEPSC amplitudes were decreased following TTX treatment, but GluA2 receptor cluster sizes were increased. i) TTX CDF of mEPSC amplitudes was significantly shifted to the left of CON CDF (KS test, D = 0.21, p = 4.85 * 10-4, CON, n = 180, TTX, n = 180). ii) TTX CDF of GluA2 receptor cluster sizes was significantly shifted to the right of CON CDF (KS test, D = 0.15, p = 0.003, CON, n = 300, TTX, n = 300). iii) 30 mEPSC amplitude quantiles from each of 6 untreated and 6 TTX-treated cells were sorted from smallest to largest, used to calculate the ratio TTX mEPSC amplitude/CON mEPSC amplitude, and plotted vs. CON mEPSC amplitude. iv) 30 GluA2 receptor cluster size quantiles from each of 10 untreated dendrites and 10 TTX-treated dendrites were sorted from smallest to largest, used to calculate the ratio TTX GluA2 cluster size/CON GluA2 cluster size, and plotted vs. CON CluA2 cluster size.