Abstract
Ribonucleoprotein (RNP) granules are membraneless electron-dense structures rich in RNAs and proteins, and involved in various cellular processes. Two RNP granules in male germ cells, intermitochondrial cement and the chromatoid body (CB), are associated with PIWI-interacting RNAs (piRNAs) and are required for transposon silencing and spermatogenesis. Other RNP granules in male germ cells, the reticulated body and CB remnants, are also essential for spermiogenesis. In this study, we disrupted FBXO24, a testis-enriched F-box protein, in mice and found numerous membraneless electron-dense granules accumulated in sperm flagella. Fbxo24 knockout (KO) mice exhibited malformed flagellar structures, impaired sperm motility, and male infertility, likely due to the accumulation of abnormal granules. The amount and localization of known RNP granule-related proteins were not disrupted in Fbxo24 KO mice, suggesting that the accumulated granules were distinct from known RNP granules. Further studies revealed that RNAs and two importins, IPO5 and KPNB1, abnormally accumulated in Fbxo24 KO spermatozoa and that FBXO24 could ubiquitinate IPO5. In addition, IPO5 and KPNB1 were recruited to stress granules, RNP complexes, when cells were treated with oxidative stress or a proteasome inhibitor. These results suggest that FBXO24 is involved in the degradation of IPO5, disruption of which may lead to the accumulation of abnormal RNP granules in sperm flagella.
eLife assessment
This important study reports that FBXO24 is essential for the normal formation and function of the sperm flagellum, motility, and male fertility in mice. The evidence supporting the direct role of this protein in preventing RNP granule formation in the sperm flagellum is compelling. This work will be of interest to biomedical researchers who work on testicular biology and male fertility.
Significance of findings
important: Findings that have theoretical or practical implications beyond a single subfield
- landmark
- fundamental
- important
- valuable
- useful
Strength of evidence
compelling: Evidence that features methods, data and analyses more rigorous than the current state-of-the-art
- exceptional
- compelling
- convincing
- solid
- incomplete
- inadequate
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Introduction
Spermatogenesis is a specialized process by which spermatogonia differentiate into spermatocytes, round spermatids, elongating spermatids, and spermatozoa by undergoing meiosis and subsequent spermiogenesis. During spermiogenesis, round spermatids undergo dramatic morphological changes such as nuclear condensation, acrosome formation, flagellum formation, and cytoplasmic removal, leading to the formation of spermatozoa (Leblond and Clermont, 1952). To fertilize eggs, spermatozoa then travel a long distance to reach eggs and pass through the cumulus-cell layer and zona pellucida that encase eggs. The motility apparatus of spermatozoa is the flagellum which is divided into three parts, a midpiece, a principal piece, and an endpiece, in order from proximal to distal (Eddy et al., 2003). The midpiece contains accessory structures called the mitochondrial sheath and outer dense fibers (ODF) that surround the axoneme, a 9+2 arrangement of microtubules, while the principal piece contains a different accessory structure called the fibrous sheath and ODFs surrounding the axoneme. In contrast, the endpiece contains no accessory structures but the axoneme. Abnormal formation of these flagellar structures could lead to male infertility (Nsota Mbango et al., 2019).
Ribonucleoprotein (RNP) granules are membraneless electron-dense structures that assemble through liquid–liquid phase separation and play critical roles in spermatogenesis (Eddy, 1974). Among the RNP granules, intermitochondrial cement (IMC) observed in late spermatocytes and the chromatoid body (CB) found in round spermatids are involved in the PIWI-interacting RNA (piRNA) pathway (Meikar et al., 2011). After meiosis, IMCs are no longer detectable because of mitochondrial dispersion, and CBs become gradually larger in round spermatids. In elongating spermatids, the CBs containing MIWI, the main effector protein of the piRNA pathway, disappear and two other RNP structures called a reticulated body and a CB remnant that contain TSKS, TSSK1, and TSSK2 appear (Shang et al., 2010). Recently, we found that Tsks knockout (KO) mice failed to generate reticulated bodies and CB remnants, and were infertile with impaired cytoplasmic removal (Shimada et al., 2023), indicating that the formation and disassembly of RNP granules is highly regulated and important for spermiogenesis.
During spermiogenesis, post-translational modifications of proteins are critical since gene transcription is thought to cease with nuclear condensation. Ubiquitination is one of the post- translational modifications in which a small protein called ubiquitin is attached to target proteins. Ubiquitinated proteins are degraded by a ubiquitin-proteasome system (UPS), which is involved in various physiological phenomena in cells, such as cell cycle regulation and signal transduction (Ciechanover and Schwartz, 1998; Mani and Gelmann, 2005; Zheng et al., 2016). Protein ubiquitination is carried out by a cascade of enzymatic reactions, including ubiquitin-activating enzyme (E1), ubiquitin-binding enzyme (E2), and ubiquitin ligase (E3), and target proteins ubiquitinated by E3 ligase are degraded by a large protein complex called the 26S proteasome. Among the approximately 600 E3 ligase genes estimated to be present in humans (Li et al., 2008), the mechanism and functions of ubiquitination mediated by the SCF (Skp1-Cul1-F-box protein) complex has been well studied (Skaar et al., 2013). The SCF complex consists of several proteins such as SKP1, a cullin protein, an F-box protein, and RBX1, and can ubiquitinate various substrates by using different F-box proteins that recognize distinct substrates. In humans, at least 38 F-box proteins have been identified, but the functions of most F-box proteins remain unclear (Kipreos and Pagano, 2000). In this study, we analyzed the function of Fbxo24 (F-box protein 24), predominantly expressed in testes, and found that FXBO24 is essential for sperm flagellar formation and male fertility.
Results
Fbxo24 is expressed predominantly in male germ cells after meiosis and interacts with SKP1
We performed RT-PCR using cDNAs obtained from multiple mouse tissues and found a specific band for Fbxo24 in testes (Figure 1A). To identify stages in which Fbxo24 was expressed in spermatogenesis, we performed RT-PCR using postnatal mouse testes over time. Fbxo24 signals increased after birth, with solid signals observed around postnatal day 21 (Figure 1B) when round spermatids appear (Kluin et al., 1982). Consistent with the RT-PCR results, single- cell transcriptome data (Hermann et al., 2018) indicates that mouse Fbxo24 and its human orthologue, FBXO24, are expressed during the post-meiotic stages (Figures S1A and B).
Pairwise sequence alignment of amino acids sequences revealed that FBXO24 is highly conserved between mice and humans (88% amino acid identity) (Figure S1C) with the F-box domains located near the N-terminus (Figure S1D). Because it has been reported that F-box proteins bind to SKP1 via the F-box domain to form the SCF complex (Bai et al., 1996; Schulman et al., 2000), we investigated the interaction of FBXO24 with SKP1 by co-immunoprecipitation using HEK293T cells. We constructed vectors that express FBXO24 tagged with 3×FLAG with (wild-type, WT) or without (ΔF) the F-box domain (Figure 1C). When SKP1-1D4 was immunoprecipitated with an anti-1D4 antibody, WT FBXO24-FLAG was co-immunoprecipitated, whereas ΔF FBXO24-FLAG was not (Figure 1D left). Conversely, when an anti-FLAG antibody was used to immunoprecipitate WT or ΔF FBXO24-FLAG, SKP1-1D4 was co-immunoprecipitated only with WT FBXO24-FLAG (Figure 1D right). These results suggest that FBXO24 could function as a component of the SCF complex in mouse testis, during the post meiotic stages of spermatogenesis.
Lack of Fbxo24 causes male sterility in mice
To examine the role of Fbxo24 in spermatogenesis, we generated Fbxo24 KO mice using the CRISPR/Cas9 system. Two gRNAs were designed to delete the majority of the coding region of Fbxo24 (Figure 1E). One hundred fertilized eggs were electroporated, and the resulting 89 two- cell stage embryos were transferred to the oviducts of pseudopregnant ICR mice. One out of 18 born pups contained the large deletion of the coding region and subsequent mating was performed to obtain Fbxo24 KO mice. We found no overt gross defects in development, behavior, or survival in Fbxo24 KO mice. We performed genomic PCR using the primers described in Figure 1E (Figure 1F) and confirmed that Fbxo24 KO mice had a deletion of 11,575 bp by Sanger sequencing (Figure 1G). Fbxo24 KO male mice were then mated with three WT females for three months to analyze fertility. Although 20 vaginal plugs were detected, no pups were born from the Fbxo24 KO male mice (Figure 1H), suggesting that Fbxo24 is indispensable for male fertility.
Disruption of Fbxo24 results in impaired spermiation and abnormal sperm morphology
We first examined spermatogenesis to determine the cause of male infertility in Fbxo24 KO mice. No apparent differences in gross testicular morphology (Figure S2A) or weights (Figure S2B) were found between controls and Fbxo24 KO mice. We then performed He-PAS staining of testicular and epididymis sections (Figures 2A and S2C). Although elongating spermatids can be found in Fbxo24 KO testes, step 16 spermatids were still present in Stage IX seminiferous tubules (Figure 2A), indicating that spermiation was impaired in Fbxo24 KO testes. In contrast, we could not find apparent differences in the cross sections of the cauda epididymis between the two genotypes (Figure S2C). Next, we observed mature spermatozoa collected from the cauda epididymis. While KO spermatozoa showed comparable head morphology to the controls, KO spermatozoa exhibited abnormal tail structures such as bent or coiled flagella (Figures 2B and C). Further analyses of sperm head morphology with immunostaining showed no overt abnormalities in the acrosome or nucleus (Figure S2D). Since abnormal flagellar morphology could result in decreased motility, we performed computer-assisted sperm analysis (CASA) after 10 and 120 minutes of incubation in capacitating medium. CASA revealed that the percentages of motile spermatozoa were significantly reduced in Fbxo24 KO mice compared to the controls (Figure 2D and Movies S1 and S2). Furthermore, all velocity parameters such as average path velocity (VAP), straight-line velocity (VSL), and curvilinear velocity (VCL) were lower in Fbxo24 KO spermatozoa (Figures 2E-G). These results indicate that FBXO24 is critical in sperm flagellum formation during spermiogenesis.
Fbxo24 KO spermatozoa cannot fertilize eggs in vitro and fail to migrate from the uterus into the oviduct
To further evaluate the fertilizing ability of Fbxo24 KO spermatozoa, we performed in vitro fertilization (IVF). Consistent with male sterility observed in vivo (Figure 1H), Fbxo24 KO spermatozoa could not fertilize eggs in vitro (Figure 3A). Furthermore, removing cumulus cells (Figure 3B) or both cumulus cells and the zona pellucida (ZP) (Figure 3C) could not rescue the fertilization rates, suggesting that Fbxo24 KO spermatozoa may have defects in not only sperm motility but also the acrosome reaction, which is a prerequisite for spermatozoa to pass through the ZP and fuse with eggs (Morohoshi et al., 2023). Therefore, we crossed Fbxo24 mutant mice with transgenic (Tg) mice which express EGFP in the acrosome and DsRed2 in the mitochondria (Red Body Green Sperm, RBGS, mice) (Hasuwa et al., 2010) and analyzed the acrosome reaction rates. RBGS spermatozoa lose EGFP fluorescent signal when the spermatozoa undergo the acrosome reaction. First, to test whether Fbxo24 KO spermatozoa were viable, we performed propidium iodide (PI) staining and found that the percentages of dead spermatozoa were significantly higher in Fbxo24 KO mice (Figure S3A). We then analyzed the acrosome reaction rates of PI-negative live spermatozoa. While the control spermatozoa underwent the acrosome reaction after 120 minutes of incubation in a capacitation medium and with Ca2+ ionophore (A23187) treatment, Fbxo24 KO spermatozoa rarely underwent the acrosome reaction even after adding A23187 (Figure S3B). Since the SNARE complex is considered critical for the acrosome reaction (Hutt et al., 2005; Katafuchi et al., 2000; Schulz et al., 1997; Tomes et al., 2002), we examined the amounts of SNARE-related proteins in mature spermatozoa using mass spectrometry and immunoblotting (Figure S3C and D), but no notable differences were found in SNARE-related proteins between the control and Fbxo24 KO spermatozoa. Further, no significant differences were found in PLCD4 that has been reported to be important for the acrosome reaction (Fukami et al., 2001).
Next, we observed sperm migration in the female reproductive tract using RBGS mice. Although the control spermatozoa migrate through the uterotubal junction (UTJ) four hours after mating, Fbxo24 KO spermatozoa hardly passed through the UTJ (Figure 3D). Since the processing of sperm membrane protein, ADAM3, is necessary for sperm migration through the UTJ (Fujihara et al., 2019, 2018a; Yamaguchi et al., 2006), we performed immunoblotting analyses and found that ADAM3 was processed correctly even in Fbxo24 KO spermatozoa (Figure 3E). We further performed immunoblotting of LY6K because Ly6k KO spermatozoa cannot migrate through the UTJ even with normal ADAM3 processing (Fujihara et al., 2014). However, we did not detect significant differences in the amounts of LY6K (Figure S3E). Considering that the acrosome reaction is not essential for sperm migration in the female reproductive tract (Morohoshi et al., 2023) and defects in sperm motility could cause impaired migration through the UTJ (Chung et al., 2014; Fujihara et al., 2018a; Miyata et al., 2015; Shimada et al., 2019), these results suggest that lower viability and decreased sperm motility can be the cause of abnormal sperm migration and male sterility in vivo.
Next, we performed intracytoplasmic sperm injection (ICSI) to examine whether nuclei of Fbxo24 KO spermatozoa have the potential to generate the next generation. We injected Fbxo24 KO sperm heads into 91 WT oocytes, and obtained 48 two-cell stage embryos (Figure 3F). By transplanting the two-cell embryos into the oviduct of pseudopregnant ICR females, we obtained four pups, which were confirmed to have the heterozygous mutation by PCR (Figures 3G and H). These results indicate that ICSI can rescue male sterility of Fbxo24 KO mice.
FBXO24 is required for the sperm midpiece formation
We analyzed mitochondria localization in Fbxo24 KO spermatozoa because abnormal mitochondrial sheath structures were found in spermatozoa with bent tails, such as in Armc12 KO, Tbc1d21 KO, and Gk2 KO mice (Shimada et al., 2021, 2019). We observed midpieces using RBGS Tg mice and revealed that mitochondria were disorganized in Fbxo24 KO spermatozoa (Figure 4A). We also observed SEPT4, a component of the annulus (Kissel et al., 2005), and found that SEPT4 localized to the proper region (Figure S4A).
We then used a scanning electron microscope (SEM) to observe the formation of mitochondrial sheaths. During the early step of mitochondrial sheath formation, mitochondria wrap around the axoneme. In both control and Fbxo24 KO spermatids, spherical mitochondria were aligned correctly at this step (Figure 4B, left panels). In the next step, mitochondria became crescent- shaped and were interlocked in the control spermatids, whereas irregular interlocking was observed in Fbxo24 KO spermatids (Figure 4B, middle panels). Subsequently, elongating mitochondria remain irregularly arranged in Fbxo24 KO spermatids (Figure 4B, right panels).
To further investigate the morphological abnormality of the midpiece in Fbxo24 KO mice, we observed the ultrastructure of the cauda epididymal spermatozoa using transmission electron microscopy (TEM). Consistent with the SEM results, we found that mitochondria were irregularly arranged in Fbxo24 KO spermatozoa (Figures 4C and D). The frequency of abnormal mitochondria was significantly higher in Fbxo24 KO spermatozoa (Figure 4E). In addition, the axoneme (AX) and outer dense fiber (ODF) were disrupted in both midpieces and principal pieces of Fbxo24 KO spermatozoa (Figures S4B-E). Furthermore, we frequently observed numerous membraneless electron-dense granules in the midpieces of Fbxo24 KO spermatozoa (Figures 4C, D, and F). We found these granules even in the axoneme (Figure. 4C). Despite the low frequency, we also found membraneless electron-dense granules in the principal pieces of Fbxo24 KO spermatozoa (Figures S4F and G).
Because membraneless electron-dense granules accumulated in Fbxo24 KO spermatozoa, we examined RNP granule-related proteins in Fbxo24 KO mice. We performed immunoblotting analyses for ADAD1, ADAD2, MILI, MIWI, RNF-17, YTHDC2, TSKS, and TSSK1, which localized in germ-cell RNP granules and are essential for spermatogenesis (Lu et al., 2023; Meikar et al., 2011; Pan et al., 2005; Shang et al., 2010; Shimada et al., 2023; Snyder et al., 2020), but we did not see any differences in the amounts of these proteins between Fbxo24 heterozygous and KO testes (Figure S5A). Further, we found no abnormalities in the localization of MIWI in Fbxo24 KO testes (Figure S5B). MIWI was localized in the IMCs of late spermatocytes and CBs of round spermatids and disappeared in elongating spermatids (Figure S5B). Further, no abnormalities were found in the immunostaining of TSKS, which localized in the reticulated body and CB remnant of elongating spermatids (Figure S5C).
IPO5 and KPNB1 amounts increase in Fbxo24 KO flagella
Since previous studies show that loss of F-box protein causes the accumulation of substrates (Nakayama et al., 2000; Tsunematsu et al., 2004), we investigated whether certain proteins accumulated in Fbxo24 KO spermatozoa. Mass spectrometry analyses revealed that the amounts of several proteins significantly increased in Fbxo24 KO mature spermatozoa (Figure 5A). Among the significantly increased proteins, we focused on IPO5 (importin 5, also known as KPNB3 and RanBP5) and KPNB1 (karyopherin subunit beta 1, also known as importin β1) because the fold changes (KO/WT) are the highest in these two proteins. Both IPO5 and KPNB1 are members of the karyopherin-β (KPNB) family of nuclear transport receptors (NTRs), which play a crucial role in nucleocytoplasmic transport (Chook and Blobel, 2001; Chook and Süel, 2011; Conti and Izaurralde, 2001; Kimura and Imamoto, 2014). In rodent testes, KPNB1 localized to the cytoplasm of spermatogonia, spermatocytes, and Sertoli cells, and IPO5 localized to the cytoplasm of elongating spermatids (Loveland et al., 2015, 2006). Immunoblotting analyses confirmed that the amounts of IPO5 and KPNB1 increased in Fbxo24 KO mature spermatozoa (Figure 5B). In contrast, the amounts of KPNA2 (Importin α1), a member of karyopherin-α (KPNA) family of NTRs which localized to the cytoplasm and nucleus of spermatocytes and the cytoplasm of elongating spermatids (Miyamoto et al., 2013), were comparable between the control and Fbxo24 KO spermatozoa. Since the anti-KPNB1 antibody did not work for immunostaining, we performed immunostaining of mature spermatozoa using an anti-IPO5 antibody. We detected IPO5 in the Fbxo24 KO flagella but not in control (Figure 5C).
FBXO24 could interact with IPO5
Next, we investigated the proteins that interacted with FBXO24. Because we could not obtain anti-FBXO24 antibodies that worked for immunoprecipitation, we generated Tg mice expressing 3×FLAG-tagged Fbxo24 under a testis-specific Prm1 promoter (Figures S6A and B). This transgene could not rescue Fbxo24 KO sperm morphology (Figure S6C). By looking for long non- coding RNAs, we found Gm36266 that is located around Exon 9 and 10 of Fbxo24, which is deleted in Fbxo24 KO mice (Figure 1E); however, a partial deletion of Exon 2 and 3 of Fbxo24 showed the same defects in sperm morphology (Figures S6D–G) as mice lacking Exon 3-10 (Figure 2B), suggesting that Fbxo24, not Gm36266, is responsible for the phenotypes observed in this study. Abnormal sperm morphology was not rescued by the transgene, likely due to lower expression of FBXO24 (Figures 5D and S6B) and/or FLAG-tag interfering with FBXO24 function. Using Tg mice, we could immunoprecipitate FBXO24-FLAG with an anti-FLAG antibody, and subsequent mass spectrometry analyses detected not only FBXO24 but also IPO5 with the highest quantitative values (Figure S6H), indicating that these proteins interact in vivo. We also found SKP1 in this analysis, consistent with the in vitro study (Figure 1D). We confirmed that IPO5 co-immunoprecipitated with FBXO24-FLAG in mouse testes using immunoblotting analysis (Figure 5D). Further, we transiently expressed 3×FLAG-tagged Fbxo24 in HEK293T cells, performed immunoprecipitation analysis using an anti-FLAG antibody, and found that FBXO24 could interact with endogenous IPO5 but not with endogenous KPNB1 (Figure 5E). To examine if FBXO24 can ubiquitinate IPO5, we performed a ubiquitination assay using HEK293T cells and revealed that ubiquitination of IPO5 was upregulated when cells were transfected with WT FBXO24, but not with ΔF FBXO24 that lacks the F-box domain (Figure 5F). These results suggest that FBXO24 recognizes and ubiquitinates IPO5 for subsequent protein degradation.
IPO5 is recruited into RNP granules under stress conditions
The amounts of known RNP granule-related proteins were not upregulated in Fbxo24 KO testes (Figure S5A) and spermatozoa (Figure 5A). In contrast, the total amount of RNAs was significantly increased in Fbxo24 KO spermatozoa (Figures 6A and B) although the contamination of somatic cells or immature spermatogenic cells were rarely found (Figure S7). Previous studies showed that various stresses, such as heat shock, arsenite treatment, or proteasome inhibition, trigger the formation of cytoplasmic stress granules (SGs), membraneless granules composed of RNPs. Further, it has been shown that SGs could contain KPNB1 (Chang and Tarn, 2009; Mahboubi et al., 2013). Increased amounts of KPNB1 and RNAs suggest that RNP granules may be formed in Fbxo24 KO spermatozoa. We analyzed whether IPO5 can localize to SGs under stress conditions to explore this possibility. We examined the subcellular localization of endogenous IPO5 and KPNB1 in COS7 cells treated with arsenite, an oxidative stress inducer. Immunostaining analyses revealed that IPO5 was predominantly localized to the cytoplasm without the stress inducer (Figure 6C); however, when cells were treated with arsenite, IPO5 was detected not only in the cytoplasm but also in cytoplasmic granules that were colocalized with KPNB1 (Figure 6C). We then analyzed if the stress of proteasome inhibition could cause a similar response. We performed immunostaining of IPO5 and KPNB1 in COS7 cells using a proteasome inhibitor, MG132. Consistent with arsenite, MG132 caused the accumulation of cytoplasmic granules that contained IPO5 and KPNB1 (Figure 6D). These results support the idea that RNP granules that contain KPNB1 and IPO5 are formed in Fbxo24 KO spermatozoa.
Discussion
Spermiogenesis is the late stage of spermatogenesis in which round spermatids differentiate into spermatozoa accompanied by drastic morphological changes such as flagellum formation, chromatin remodeling, and cytoplasmic removal. Protein ubiquitination of target proteins for degradation by the UPS is crucial to maintain functional spermatogenesis (Richburg et al., 2014). In this study, we focused on testis-enriched F-box protein FBXO24. We confirmed that Fbxo24 was predominantly expressed in the testis, and its expression level increased in the late stage of spermatogenesis. The analyses using cultured cells and Tg testes suggested that FBXO24 could interact with SKP1 to form the SCF complex. Further, we deleted Fxbo24 using the CRISPR/Cas9 system and found that Fbxo24 KO mice exhibited abnormal flagellar structures and male infertility. Fxbo24 KO spermatozoa failed to fertilize eggs even with IVF, while ICSI gave offspring.
More detailed observation of the midpiece of Fbxo24 KO spermatozoa using electron microscopy revealed abnormalities in mitochondria coiling, which occurred in the late stages of spermatogenesis and was consistent with the Fbxo24 expression timing. Furthermore, Fbxo24 KO spermatozoa showed markedly reduced motility. These results suggest that the primary cause of infertility is impaired sperm migration in the female reproductive tract due to reduced sperm motility. In addition to the abnormal flagellar morphology, Fbxo24 KO spermatozoa could not undergo the acrosome reaction even after the A23187 treatment. We analyzed the amounts of SNARE-related proteins and PLCD4; however, no overt differences were found between the control and Fbxo24 KO spermatozoa. Recently, we found that FER1L5 is important for Ca2+- dependent acrosome reaction (Morohoshi et al., 2023), but no antibodies are available to analyze the amount of FER1L5. It is possible that FER1L5 or unknown proteins involved in the acrosome reaction deteriorated in Fbxo24 KO spermatozoa. Alternatively, it is possible that acrosome reaction failure may be caused by impaired sperm capacitation associated with abnormal flagellar structures.
The TEM analyses observed numerous membraneless electron-dense granules in Fbxo24 KO sperm flagella. Although the irregular arrangement of sperm mitochondria has been reported in KO mice of some mitochondria-associated proteins (Shimada et al., 2021, 2019), numerous granules have not been observed in these KO spermatozoa. Proteomic analyses revealed that IPO5 and KPNB1 accumulated in Fbxo24 KO spermatozoa without significant elevation of mitochondria-associated proteins. The lack of accumulation of KPNA2, which is part of the importin family, also suggests that there is selectivity in the accumulated proteins. Abnormal accumulation of proteins, including IPO5 and KPNB1, may lead to morphological abnormalities in sperm flagella since the SCF complex is critical for protein degradation and consequently regulate various cellular processes (Skaar et al., 2013). FBXO24 likely plays a role in catalyzing protein degradation during spermiogenesis. Because we found that FBXO24 could interact with IPO5 in testes and catalyze ubiquitination of IPO5, FBXO24 may degrade IPO5 in the testis.
Recently, mice lacking both PSME4 and ECPAS, proteasome-associated proteins, were shown to exhibit impaired male fertility with disorganized mitochondrial sheath, but numerous membraneless granules were not observed (Sato et al., 2023), suggesting that the accumulation of the granules is specific to Fbxo24 deletion rather than simply caused by proteasome defects.
In addition to proteins, the total RNA amount increased in Fbxo24 KO spermatozoa, suggesting that the abnormal granules observed in Fbxo24 KO flagella may consist of RNPs. In germ cells, RNP granules have been well studied and shown to be essential for spermatogeneses, such as IMCs, CBs, reticulated bodies, and CB remnants (Chuma et al., 2006; Meikar et al., 2011; Shimada et al., 2023). RNP granules are membraneless electron-dense structures that are similar to the abnormal granules in Fbxo24 KO; however, the localization of MIWI, an IMC and CB marker, and TSKS, a reticulated body and CB remnant marker, was not disrupted in the KO. These results suggest that electron-dense granules accumulated in Fbxo24 KO spermatozoa are different from well-studied RNP granules. SGs are also membraneless electron-dense granules that contain RNPs, which assemble through liquid–liquid phase separation in response to cellular stresses (Buchan and Parker, 2009; Protter and Parker, 2016; Taylor et al., 2016). While transient SGs formed in response to oxidative stress or heat shock play roles in translational arrest to ensure cell survival, chronic SGs are relevant to neurodegenerative diseases (Marcelo et al., 2021; Reineke and Neilson, 2019). It has been shown that, under arsenite-induced oxidative stress, KPNB1 relocates to SGs (Chang and Tarn, 2009; Mahboubi et al., 2013).
Because we found that not only KPNB1 but also IPO5 can be recruited to SGs after arsenite or proteasome inhibitor treatment, electron-dense granules observed in Fbxo24 KO spermatozoa may be RNP granules consisting of IPO5 and KPNB1. Our results suggest that FBXO24 is responsible for degrading proteins such as IPO5, which may prevent the accumulation of abnormal RNP granules. While this paper was under review, another group reported analyses of Fbxo24 KO mice that exhibit not only disorganized mitochondrial coiling but also abnormal head morphology (Li et al., 2024). The differences from our study may be due to different mouse genetic backgrounds. The other group showed that FBXO24 mediates the degradation of MIWI via K48-linked polyubiquitination (Li et al., 2024). FBXO24 may be involved in the degradation of multiple proteins including IPO5 to support proper spermiogenesis.
In conclusion, we reveal that numerous RNP granules accumulated in sperm flagella when FBXO24, which is related to the UPS was depleted. Small numbers of the RNP granules were found even in the control, suggesting that the ability to generate the granules is present in WT testes but may be suppressed by FBXO24. FBXO24 can be a key molecule for understanding the formation and function of the aberrant RNP granules in male fertility. Because amino acid sequences and expression patterns of FBXO24 are conserved, FBXO24 may also play similar roles in human testes. Our research may lead to development of new approaches to infertility treatment and nonhormonal male contraceptives.
Materials and Methods
Animals
All animal experiments were approved by the Animal Care and Use Committee of the Research Institute for Microbial Diseases, Osaka University. Mice were purchased from CLEA Japan (Tokyo, Japan) or Japan SLC (Shizuoka, Japan). WT or Fbxo24 heterozygous (HET) mice were used as controls. All gene-modified mice generated in this study will be made available through either the RIKEN BioResource Research Center or the Center for Animal Resources and Development (CARD), Kumamoto University.
Isolation of RNA and RT-PCR
Adult mouse multi-tissues and mouse testes at different ages were obtained from C57BL/6N mice. RNA samples were isolated and purified using TRIzol (Thermo Fisher Scientific, Waltham, MA, USA). RNA was reverse transcribed to cDNA using SuperScript IV First-Strand Synthesis System (Thermo Fisher Scientific) using an oligo (dT) primer. PCR was performed using the KOD Fx Neo DNA Polymerase (Toyobo, Tokyo, Japan). Primers used in this study are listed in Table S1.
Transfection of HEK293T cells and induction of stress
HEK293T cells (Tiscornia et al., 2006) and COS7 cells were maintained in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum (Sigma-Aldrich, St. Louis, MO, USA) and 1% Gibco™ penicillin/streptomycin (Thermo Fisher Scientific) at 37°C under 5% CO2. For transfection, HEK293T cells were transiently transfected with the plasmid DNA using the calcium phosphate transfection method (Tiscornia et al., 2006), and cultured for 24 h before harvesting. For oxidative stress, COS7 cells were treated with 0.5 mM sodium arsenite in medium for 30 min and controls were incubated with water in medium. For proteasome inhibition, COS7 cells were treated with 10 μM sodium MG132 (Sigma-Aldrich) in medium for 3 h and controls were incubated with DMSO in medium.
Generation of Fbxo24 KO mice
Fbxo24 KO mice were generated using CRISPR/Cas9. Three crRNAs, 5′- TGTGGAGGCGCATCTGTCGA -3′, 5′- TCCTGAAGGAAGTCGAGCCG -3′ and 5′-TCAGTTGTTCCCCCCAGAGC -3′ were designed using the online source CRISPRdirect (Naito et al., 2015) and annealed to SygRNA™ Cas9 Synthetic tracrRNA (#TRACRRNA05N-5NMOL, Sigma-Aldrich). The gRNAs were mixed with TrueCut™ Cas9 Protein v2 (A36498, Thermo Fisher Scientific) and incubated at 37°C for 5 min to form CRISPR/Cas9 complexes. The complexes were introduced into fertilized eggs which were from super-ovulated WT B6D2F1 females mated with B6D2F1 males. Electroporation was performed using the super electroporator NEPA21 (NEPA GENE, Chiba, Japan) (poring pulse, voltage: 225 V, pulse width: 2 ms, pulse interval: 50 ms, number of pulses: +4, and attenuation: 10%; transfer pulse, voltage: 20 V, pulse width: 50 ms, pulse interval: 50 ms, number of pulses: ±5, and attenuation: 40%). The treated eggs were developed into two-cell-stage embryos by cultivating in KSOM medium (Ho et al., 1995) and transplanted into pseudo-pregnant ICR females. The obtained pups were genotyped by PCR to detect the KO and/or WT allele and then subjected to Sanger sequencing to verify the deleted sequence.
Fertility test
For the in vivo fertility analysis, sexually mature KO male mice or WT male mice were caged with three 8-week-old B6D2F1 female mice for three months and plugs were checked every morning. The number of pups was counted on the day of birth. For the in vitro fertility assay, in vitro fertilization (IVF) analysis was performed as previously described (Morohoshi et al., 2021) with some minor changes. For ZP-free oocytes, sperm insemination was performed at a final density of 2 × 104 spermatozoa/mL.
Histological analysis
PAS staining of sections were performed as previously described (Morohoshi et al., 2020). Testes or cauda epididymis were fixed at 4°C in Bouin’s solution (Polysciences, Inc., Warrington, PA, USA) and were processed for paraffin embedding. Paraffin sections were cut at a thickness of 5 μm using an HM325 microtome (Microm, Walldorf, Germany). After rehydrating the sections, they were stained with 1% periodic acid (Nacalai Tesque, Kyoto, Japan) and Schiff’s reagent (FUJIFILM WakoPure Chemical, Osaka, Japan) for 20 min each at room temperature. The sections were then counterstained with Mayer’s hematoxylin solution (FUJIFILM WakoPure Chemical). The sections were observed with an Olympus BX-53 microscope (Tokyo, Japan).
Morphological and motility analysis of spermatozoa
Spermatozoa extracted from cauda epididymis were suspended in TYH medium (Muro et al., 2016). After 10 min incubation, spermatozoa were collected to observe morphology. Sperm motility was analyzed as previously described (Miyata et al., 2021, 2020). The motility of more than 200 spermatozoa was measured after incubation at 10 and 120 min in TYH medium using CEROS II (software version 1.4; Hamilton Thorne Biosciences, Beverly, MA, USA).
Observation of sperm flagellum ultrastructure using TEM
Cauda epididymis specimens were prepared as previously described (Shimada et al., 2019). The prepared samples were observed using a JEM-1400 plus electron microscope (JEOL, Tokyo, Japan) at 80 kV with a CCD Veleta 2K × 2K camera (Olympus).
Observation of sperm mitochondria during spermatogenesis using SEM
Testes specimens were prepared as previously described (Shimada et al., 2019). The prepared samples were observed using a S-4800 field emission scanning electron microscope (Hitachi, Tokyo, Japan).
Pfam domain search
Pfam domains were detected from amino acid sequences using Simple Modular Architecture Research Tool (SMART) (http://smart.embl-heidelberg.de/). Mouse FBXO24 amino acid sequence (CCDS51674.1) and human FBXO24 (CCDS5698.1) were obtained from the CCDS database (https://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi).
Alignment of amino acid sequences
Amino acid sequences of Mouse FBXO24 (CCDS51674.1) and human FBXO24 (CCDS5698.1) were aligned using “Clustal Omega (https://www.ebi.ac.uk/Tools/msa/clustalo/)”. Aligned sequences were edited using Jalview ver.2.11.2.0 (https://www.jalview.org/). Domains within the sequences were identified using “SMART (http://smart.embl-heidelberg.de/)”.
In silico expression data analysis
Single-cell transcriptome data in the mouse and human testis was obtained from previously published work (Hermann et al., 2018). Fbxo24 expression in those cells was analyzed using the Loupe Cell Browser 3.3.1 (10X Genomics, Pleasanton, CA, USA).
Plasmids
The open reading frames (ORFs) of Fbxo24 and Skp1 were cloned and amplified using cDNA obtained from mouse testis and inserted into the multiple cloning site of pCAG1.1 vector (Addgene; Plasmid #173685). To generate the expression vector coding Fbxo24(ΔF-box), inverse PCR was performed with KOD -Plus- Mutagenesis Kit (Toyobo, Tokyo, Japan) according to the manufacturer’s instructions. Primers used for inverse PCR are listed in Table S1. HA- human HA-Ubiquitin was a gift from Edward Yeh (Addgene plasmid # 18712; Kamitani et al., 1997)
Observation of spermatozoa migration inside the female reproductive tract
The Fbxo24 KO mouse line was crossed with B6D2 Tg mice carrying CAG/Su9-DsRed2, Acr3-EGFP (RBGS) (Hasuwa et al., 2010) to label the acrosome with EGFP. B6D2F1 females were superovulated by injecting pregnant mare serum gonadotropin (PMSG, ASKA Pharmaceutical, Tokyo, Japan) followed by human chorionic gonadotropin (hCG, ASKA Pharmaceutical) 48 h appart. The superovulated female was mated with a WT male or Fbxo24 KO male mice 14 h after the hCG injection. Female mice were sacrificed 4 h after confirming a vaginal plug and the female reproductive tracts were collected. Spermatozoa inside the oviducts were observed using a BZ- X710 microscope (Keyence Japan, Osaka, Japan).
Protein extraction from testes, spermatozoa, and culture cells
HEK293T cells were lysed in 1% Triton X-100 lysis buffer [1% Triton X-100, 50 mM Tris-HCl pH 7.4, 150 mM NaCl, and 1% (v/v) protease inhibitor cocktail (Nacalai Tesque)] at 4°C with end-over-end rotation for 2 h. Testes or spermatozoa were homogenized in 1% Triton X-100 lysis buffer at 4°C with end-over- end rotation for 2 h or sample buffer containing 1 M Tris-HCL pH 6.8, 2% SDS, 10% Glycerol, and 0.005% Bromophenol Blue, and boiled for 5 min. Supernatants were obtained after centrifugation at 15,300 × g for 15 min at 4°C.
Immunoprecipitation
Immunoprecipitation was performed as described previously (Kaneda et al., 2023). Proteins from HEK293T cells were extracted using 1% Triton X-100 lysis buffer [1% Triton X-100, 50 mM Tris-HCl pH 7.4, 150 mM NaCl, and 1% (v/v) protease inhibitor cocktail (Nacalai Tesque)]. The lysates were centrifuged at 15,300 g for 5 min at 4°C to collect supernatants. Protein lysates were mixed with 20 μL Protein G-conjugated magnetic beads (#10009D, Thermo Fisher Scientific) preincubated with 1.0 μg antibody. After incubation for 1 h at 4°C, the beads were washed three times with wash buffer (40 mM Tris-HCl pH 7.5, 150 mM NaCl, 0.1% Triton X-100 and 10% glycerol). For immunoblotting, the immune complexes were eluted with 2×SDS sample buffer (132 mM Tris HCl pH7.4, 4% SDS, 20% glycerol, and 0.01% Bromophenol Blue) for 10 min at 70°C. For mass spectrometry (MS), the immune complexes were eluted with 150 ng/µL 3×FLAG peptide (Sigma-Aldrich) in TBS solution for 30 min at 4°C. Antibodies used in this study are listed in Table S2.
Immunoblotting
Proteins were separated with sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) under reducing conditions using 2-ME and transferred onto polyvinylidene difluoride (PVDF) membrane using the Trans Blot Turbo system (Bio-Rad, Hercules, CA, USA). After blocking with 10% skim milk (Becton Dickinson, Franklin Lakes, NJ, USA) in TBST, the blots were incubated with primary antibody overnight at 4°C, and then incubated with HRP-conjugated secondary antibodies (1:5000) for 2 h at room temperature. Chemiluminescence was detected with Chemi-Lumi One Super (#02230, Nacalai Tesque) or Chemi-Lumi One Ultra (#11644, Nacalai Tesque).
In vivo ubiquitination assay, HEK293T cells were transiently transfected with the plasmid DNA following the transfection protocol mentioned above. After 36 h of transfection, HEK293T cells were treated with 10 µM MG132 for 9 h. Immunoprecipitation and immunoblotting were performed following the above mentioned protocols.
Assessment of sperm viability in vitro
Spermatozoa extracted from cauda epididymis were dispersed in TYH medium and incubated for 10 and 120 min at 37°C under 5% CO2. PI was carefully added to the TYH drop to achieve a final concentration of 10 μg/ml and a small volume of the sperm suspension was placed on a glass slide. More than 200 spermatozoa were counted for each trial.
Assessment of acrosome reaction in vitro
The Fbxo24 KO mouse line was crossed with B6D2 Tg mice carrying CAG/Su9-DsRed2, Acr3-EGFP (RBGS) (Hasuwa et al., 2010) to label the acrosome with EGFP. Spermatozoa extracted from cauda epididymis were dispersed in TYH medium for 10 and 120 min of incubation at 37°C under 5% CO2. After 120 min of incubation, spermatozoa were incubated with Ca2+ ionophore A23187 (Merck, Rahway, NJ, USA) at 20 μM to induce the acrosome reaction at 37°C under 5% CO2. 10 mM stock solution of Ca2+ ionophore A23187 in DMSO was diluted 10 times with TYH medium before carefully adding to the sperm suspension to reach the final concentration. PI (10 μg/ml at final concentration) was added to the TYH drop, and a small volume of the sperm suspension was placed on a glass slide. Acrosome- reacted spermatozoa were determined by observing EGFP signals while distinguishing viable spermatozoa with PI staining using a BX-53 microscope (Olympus). More than 200 spermatozoa were counted for each trial.
Intracytoplasmic sperm injection (ICSI)
B6D2F1 females were superovulated by injecting PMSG (ASKA Pharmaceutical) followed by hCG (ASKA Pharmaceutical) 48 h later. MII oocytes were collected 14 h after injection of hCG. Cumulus cells were removed from the collected eggs after 10 min treatment with 330 µg/mL hyaluronidase (Sigma-Aldrich). Cumulus-free oocytes were placed in KSOM medium at 37°C under 5% CO2 until just before performing ICSI. Each sperm head separated from the tail by applying a few piezo pulses was injected into a cumulus- free MII oocyte using a piezo manipulator (PrimeTech, Tokyo, Japan). Obtained two-cell embryos were transferred to pseudopregnant ICR females the next day.
Immunofluorescence of testis cross-sections
Testes were fixed in 4% paraformaldehyde in PBS for 3 h at 4°C soon after dissection and infused with 15% and 30% sucrose in PBS at 4°C. The testes were embedded in OCT medium (Tissue-Tek, Miami, FL, USA) and frozen in liquid nitrogen. Testis blocks were sectioned at 10 μm thickness using a cryostat and the sections were dried on microscope slides at 42°C to make them adhere. The testis sections were then processed and imaged in the same manner as sperm immunostaining. After permeabilization with 0.1% Triton X-100 in PBS for 15 min, the sections were blocked with 3% bovine serum albumin (Sigma-Aldrich), 10% goat serum, and 0.1% Triton X-100 in PBS for 1 h at room temperature.
The sections were then incubated with primary antibody overnight at 4°C. After washing the sections with PBS for 10 min, the sections were secondarily blocked with 3% bovine serum albumin (Sigma-Aldrich), and 10% goat serum in PBS for 1 h at room temperature. The sections were further incubated with fluorophore-conjugated secondary antibodies (1:2000) and Alexa Fluor 568 Dye PNA Lectin (1:2000) for 2 h at room temperature. After a wash with PBS, the sections were incubated with Hoechst 33342 (Thermo Fisher Scientific) in PBS (1:5000) for 5 min at room temperature. Once washed with PBS, the sections were mounted with Shandon Immu- Mount (Thermo Fisher Scientific) before imaging.
Immunostaining of spermatozoa
Spermatozoa extracted from cauda epididymis were dispersed in PBS. A small aliquot of the sperm suspension was spotted onto glass slides and then air-dried at room temperature. Spermatozoa were then fixed with 4% paraformaldehyde in PBS for 10 min and washed three times with PBS for 5 min each. The slides were blocked with blocking solution (5% bovine serum albumin and 10% goat serum in PBS) for 1 h at room temperature. The slides were incubated with primary antibody overnight at 4°C, washed with PBS three times for 5 min each, and incubated with Alexa Fluor conjugated secondary antibody for 2 h at room temperature. The slides were washed with PBS three times for 5 min each, incubated with Hoechst 33342 (2 μg/ml) (Thermo Fisher Scientific) for 5 min, and washed with PBS three times for 5 min each. The slides were mounted with Shandon Immu-Mount (Thermo Fisher Scientific) before imaging. Fluorescent images were captured with an Olympus BX-53 microscope (Olympus).
Immunofluorescence of COS7 cells
COS7 cells were fixed with 4% paraformaldehyde in PBS for 15 min at room temperature. After permeabilization with 0.1% Triton X-100 in PBS for 15 min, cells were blocked with 1% bovine serum albumin (Sigma-Aldrich) in PBS for 1 h at room temperature. The cells were then incubated with primary antibody overnight at 4°C. After washing three times with PBS, the cells were further incubated with fluorophore-conjugated secondary antibodies (1:1000) for 2 h at room temperature. After washing three times with PBS, the cells were incubated with Hoechst 33342 (Thermo Fisher Scientific) in PBS (1:5000) for 5 min at room temperature. After washing three times with PBS, the cells were mounted with Shandon Immu- Mount (Thermo Fisher Scientific) before imaging.
Extraction of RNA from epididymal spermatozoa
A small cut was made in the cauda epididymis with ophthalmic scissors and spermatozoa were squeezed out from the cut. Collected spermatozoa were dispersed in PBS and the number of spermatozoa was counted using a hemacytometer. Spermatozoa were centrifuged at 15,300 g for 2 min and the sperm pellet was lysed in TRIzol (Thermo Fisher Scientific). Chloroform was added to the lysate and incubated for 5 min at room temperature. The sample was centrifuged at 15,300 g for 15 min and the aqueous phase was transferred to a fresh centrifuge tube. To precipitate RNA, an equal volume of isopropanol was added to the aqueous phase and centrifuged at 15,300 g for 20 min at 4°C. The supernatant was removed and the pellet was washed with 75% Ethanol. The washed pellet was dried and resuspended in nuclease-free water. The RNA solution was DNAse treated using deoxyribonuclease (RT Grade) (NIPPON GENE, Tokyo, Japan) to remove genomic DNA. Then the RNA solution was incubated at 55°C for 10 min. The sample was stored at -80°C. The concentration was measured using NanoDrop One (Thermo Fisher Scientific). The TAE/formamide method (Masek et al., 2005) was used to perform electrophoresis of RNA.
Statistical analysis
All statistical analyses were performed using the two-tailed Welch’s t-test using Microsoft Office Excel 2016 (Microsoft Corporation, Redmond, WA, USA). Differences were considered significant at P<0.05 (*), P<0.01 (**), P<0.001 (***). Error bars are standard deviation.
Acknowledgements
The authors would like to thank Dr. Julio M. Castaneda and Ferheen Abbasi for the critical reading of the manuscript and Ms. Natsuki Furuta for technical assistance, and the members of both the Department of Experimental Genome Research and the nonprofit organization (NPO) for Biotechnology Research and Development for experimental assistance and discussion. We also thank Dr. Yoichi Miyamoto for kindly providing antibodies against importins (National Institutes of Biomedical Innovation, Health and Nutrition), and Dr. Akinori Ninomiya and Dr. Fuminori Sugihara for MS analysis (Core Instrumentation Facility, Research Institute for Microbial Diseases, Osaka University). This research was supported by the Ministry of Education, Culture, Sports, Science and Technology (MEXT)/Japan Society for the Promotion of Science (JSPS) KAKENHI grants (JP23KJ1523 to Y.K., JP22H03214, JP23K18328 to H.M., JP23K05831 to K.S., JP22K15030 to M.K., and JP19H05750, JP21H04753, JP21H05033 to M.I.); Takeda Science Foundation grant to H.M., K.S., and M.I.; JST FOREST (JPMJFR211F to H.M.); the Eunice Kennedy Shriver National Institute of Child Health and Human Development (P01HD087157 and R01HD088412 to M.I.); and the Bill & Melinda Gates Foundation (Grand Challenges Explorations grant INV-001902 to M.I.).
Competing interests
The authors declare no competing interests.
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