(a) Representative curves for 10 preconditioning cycles for the SDFT and CDET fascicles in the foetus and 1–2 years age group. (b) Representative force-extension curves to failure for the SDFT and …
Fascicle and IFM mechanical properties.
(a) Schematic of the equine forelimb with the CDET and SDFT highlighted. (b) Tendon structure (partially reproduced from Figure 1, Spiesz et al., 2015), Journal of Orthopaedic Research, published …
(a) Representative curves for 10 preconditioning cycles for the SDFT and CDET IFM in the foetus and 1–2 years age group. (b) Representative force-extension curves to failure for the SDFT and CDET …
(a) Representative images of H and E sections of the SDFT and CDET demonstrate structural development: foetus, 0 days (did not weight-bear), 0–1 year, and 1–2 years, whilst (b) Radar plots enable …
* Significant difference between tendons, a-f significant difference between age groups. Error bars depict standard deviation.
IFM and fascicle staining scores are shown for decorin (DCN), fibromodulin (FMOD), lubricin (PRG4), and tenascin-C (TNC) in the SDFT and CDET, alongside representative images of immunohistochemical …
Error bars depict standard deviation.
(a) Heatmap of differentially abundant proteins in foetus, 0 days (did not weight-bear), 0–1 month, 3–6 months, and 1–2 years SDFT IFM and fascicles (p<0.05, fold change ≥2). Heatmap colour scale …
* Significant difference between tendons, a-e significant difference between age groups. Error bars depict standard deviation.
Proteins are arranged into colour-coded divisions and categories. Bar graphs profile the relative abundance of each protein at each development stage, a foetus, b 0 days, c 0–1 month, d 3–6 months, …
Protein | Division | Category | Highest mean cond. | a b c d e |
---|---|---|---|---|
SERPINH1 | Matrisome-associated | ECM Regulators | Foetus | ![]() |
COL14A1 | Core matrisome | Collagens | 0–1 month | ![]() |
ASPN | Core matrisome | Proteoglycans | 0–1 month | ![]() |
FMOD | Core matrisome | Proteoglycans | 0–1 month | ![]() |
KERA | Core matrisome | Proteoglycans | 0–1 month | ![]() |
FBLN5 | Core matrisome | ECM Glycoproteins | 0–1 month | ![]() |
FGB | Core matrisome | ECM Glycoproteins | 0–1 month | ![]() |
FGG | Core matrisome | ECM Glycoproteins | 0–1 month | ![]() |
COL1A2 | Core matrisome | Collagens | 3–6 months | ![]() |
COL2A1 | Core matrisome | Collagens | 3–6 months | ![]() |
COL4A1 | Core matrisome | Collagens | 3–6 months | ![]() |
COL4A2 | Core matrisome | Collagens | 3–6 months | ![]() |
COL6A3 | Core matrisome | Collagens | 3–6 months | ![]() |
BGN | Core matrisome | Proteoglycans | 3–6 months | ![]() |
HSPG2 | Core matrisome | Proteoglycans | 3–6 months | ![]() |
ADIPOQ | Core matrisome | ECM Glycoproteins | 3–6 months | ![]() |
FBN1 | Core matrisome | ECM Glycoproteins | 3–6 months | ![]() |
FN1 | Core matrisome | ECM Glycoproteins | 3–6 months | ![]() |
LAMB2 | Core matrisome | ECM Glycoproteins | 3–6 months | ![]() |
LAMC1 | Core matrisome | ECM Glycoproteins | 3–6 months | ![]() |
NID1 | Core matrisome | ECM Glycoproteins | 3–6 months | ![]() |
ANXA4 | Matrisome-associated | ECM-affiliated | 3–6 months | ![]() |
S100A4 | Matrisome-associated | Secreted Factors | 3–6 months | ![]() |
COL21A1 | Core matrisome | Collagens | 1–2 years | ![]() |
COL3A1 | Core matrisome | Collagens | 1–2 years | ![]() |
COL5A1 | Core matrisome | Collagens | 1–2 years | ![]() |
COL5A2 | Core matrisome | Collagens | 1–2 years | ![]() |
COL6A1 | Core matrisome | Collagens | 1–2 years | ![]() |
COL6A2 | Core matrisome | Collagens | 1–2 years | ![]() |
DCN | Core matrisome | Proteoglycans | 1–2 years | ![]() |
LUM | Core matrisome | Proteoglycans | 1–2 years | ![]() |
OGN | Core matrisome | Proteoglycans | 1–2 years | ![]() |
PRELP | Core matrisome | Proteoglycans | 1–2 years | ![]() |
COMP | Core matrisome | ECM Glycoproteins | 1–2 years | ![]() |
DPT | Core matrisome | ECM Glycoproteins | 1–2 years | ![]() |
TGFBI | Core matrisome | ECM Glycoproteins | 1–2 years | ![]() |
IFM and fascicle matrisome proteins intensity.
Proteins are arranged into colour-coded divisions and categories. Bar graphs on the right profile the relative abundance of each protein at each development stage, a foetus, b 0 days, c 0–1 month, d …
Protein | Division | Category | Highest mean cond. | A B C D e |
---|---|---|---|---|
COL11A1 | Core matrisome | Collagens | Foetus | ![]() |
DCN | Core matrisome | Proteoglycans | Foetus | ![]() |
FMOD | Core matrisome | Proteoglycans | Foetus | ![]() |
KERA | Core matrisome | Proteoglycans | Foetus | ![]() |
PCOLCE | Core matrisome | ECM Glycoproteins | Foetus | ![]() |
SERPINF1 | Matrisome-associated | ECM Regulators | Foetus | ![]() |
ANXA1 | Matrisome-associated | ECM-affiliated Proteins | Foetus | ![]() |
ANXA2 | Matrisome-associated | ECM-affiliated Proteins | Foetus | ![]() |
ANXA5 | Matrisome-associated | ECM-affiliated Proteins | Foetus | ![]() |
LGALS1 | Matrisome-associated | ECM-affiliated Proteins | Foetus | ![]() |
COL12A1 | Core matrisome | Collagens | 0 days | ![]() |
COL3A1 | Core matrisome | Collagens | 1–2 years | ![]() |
PRELP | Core matrisome | Proteoglycans | 1–2 years | ![]() |
COMP | Core matrisome | ECM Glycoproteins | 1–2 years | ![]() |
FN1 | Core matrisome | ECM Glycoproteins | 1–2 years | ![]() |
Reagent type (species) or resource | Designation | Source or reference | Identifiers | Additional information |
---|---|---|---|---|
Biological sample (Equus caballus) | Superficial digital flexor tendon and common digital extensor tendon | Equine practices and commercial abattoir | Foetus-2 years old | |
Biological sample (Equus caballus) | Primary superficial digital flexor tendon tenocytes | Commercial abattoir | P3 from adult specimens | |
Antibody | Anti-decorin (mouse IgG) | Other | (1:1500), Prof. Caterson, Cardiff University, UK | |
Antibody | Anti-proteoglycan 4 (mouse IgG) | Other | (1:200), Prof. Caterson, Cardiff University, UK | |
Antibody | Anti-fibromodulin (rabbit IgG) | Other | (1:400), Prof. Roughley, McGill University, Canada | |
Antibody | Anti-tenascin C (mouse IgG) | Santa Cruz Biotechnology | RRID:AB_785991 | (1:250) |
Antibody | Anti-elastin (mouse IgG) | Abcam | RRID:AB_2099589 | (1:250) |
Antibody | Zytochem Plus HRP polymer anti-mouse | Zytomed systems | RRID:AB_2868565 | (75 µL) |
Antibody | Zytochem Plus HRP polymer anti-rabbit | Zytomed systems | RRID:AB_2868566 | (75 µL) |
Sequenced-based reagent | Equus caballus TGFB1 Accell SMARTpool | Dharmacon, Horizon Discovery | https://horizondiscovery.com/en/products/tools/Custom-SMARTpool | (1 µM) |
Sequenced-based reagent | Equus caballus Accell Non-targeting siRNA | Dharmacon, Horizon Discovery | https://horizondiscovery.com/en/products/tools/Custom-SMARTpool | (1 µM) |
Peptide, recombinant protein | Recombinant Human TGF-β1 | Peprotech | 100–21 | (10 ng/mL) |
Commercial assay or kit | FASTIN Elastin Assay | Biocolor | https://www.biocolor.co.uk/product/fastin-elastin-assay/ | |
Chemical compound, drug | RapiGest SF | Waters | https://www.waters.com/waters/en_GB/RapiGest-SF-Surfactant/ | (0.1% w/v) |
Software, algorithm | HistoQuest Analysis Software | Tissuegnostics | RRID:SCR_014823 | |
Software, algorithm | Adobe Photoshop CS3 | Adobe | RRID:SCR_014199 | |
Software, algorithm | Peaks Studio v8.5 | Bioinformatics Solutions | www.bioinfor.com/peaks-studio | |
Software, algorithm | Ingenuity Pathway Analysis | Qiagen | RRID:SCR_008653 | |
Software, algorithm | Matrisome | PMID:2197732 | http://matrisomeproject.mit.edu | |
Software, algorithm | Mascot | Matrix Science | RRID:SCR_014322 | |
Software, algorithm | Neopeptide Analyser | PMID:28503667 | https://github.com/PGB-LIV/neo-pep-tool/releases/ | |
Software, algorithm | SigmaPlot | Systat Software Inc | RRID:SCR_003210 | |
Software, algorithm | GProX | PMID:21602510 | RRID:SCR_000273 | |
Other | Chondroitinase ABC from Proteus vulgaris | Merck | C2509 | (0.2 U/mL) |
Other | Hyaluronidase from bovine testes | Merck | H3506 | (4800 U/mL) |
Histologic variables used in the H and E scoring of the SDFT and CDET sections and the analysis method and reporting criteria adopted.
Gene primer sequences used in relative mRNA expression analysis.
Samples used for analysis along with statistical test used for analysis.
Collagens and proteoglycans identified in SDFT IFM and fascicle.
Correlation analysis of IFM protein abundance and mechanical properties across development.
Correlation analysis of TGFB1 whole tendon mRNA expression and IFM protein abundance across development.