Cell line (Homo sapiens, chondrosarcoma) | JJ012 | Dr. JA Block (Rush University Medical Center, Chicago, IL, USA) | RRID: CVCL_D605 | |
Cell line (Homo sapiens, chondrosarcoma) | CH2879 | Professor A Llombart Bosch (University of Valencia, Spain) | RRID: CVCL_9921 | |
Cell line (Homo sapiens, osteosarcoma) | U2OS | From Dr. Jer-Yuh Liu | RRID:CVCL_0042 | |
Cell line (Homo sapiens, osteosarcoma) | MG63 | From Dr, Shian-Ying Sung | RRID:CVCL_0426 | |
Cell line | HEK293T | Academia Sinica, Taiwan | RRID: CVCL_0063 | For lentiviral production |
Cell line | NP-Chon | From bone surgeon Dr.Teng-Le Huang | Detail information was in the supplement file | Isolated from clinical tissue sample |
Biological sample | Cartilage tissue | From bone surgeon Dr.Teng-Le Huang | Detail information was in the supplement file | Isolated from clinical tissue sample |
Strain and strain background | DH5α | This paper | | Competent cell for construction |
Strain and strain background | Lentivirus | Academia Sinica, Taiwan | | For shRNA transfection |
Strain and strain background | NU/NU (Crl:NU-Foxn1nu)/female | BioLASCO | | For animal study |
Transfected construct (human) | shEZH2#3 | Academia Sinica, Taiwan | TRCN0000040076 | Lentiviral construct to transfect and express the shRNA. |
Transfected construct (human) | shEZH2#4 | Academia Sinica, Taiwan | TRCN0000010475 | Lentiviral construct to transfect and express the shRNA. |
Transfected construct (human) | shSULF1#7 | Academia Sinica, Taiwan | TRCN0000373658 | Lentiviral construct to transfect and express the shRNA. |
Transfected construct (human) | shSULF1#8 | Academia Sinica, Taiwan | TRCN0000373588 | Lentiviral construct to transfect and express the shRNA. |
Transfected construct (human) | pcDNA3.1(-)-Luc | This paper | | Transfected construct for luciferase expression (human) |
Transfected construct (human) | pcDNA3.1(-)-SULF1 WT | This paper | | Transfected construct for WT SULF1 expression (human) |
Transfected construct (human) | pcDNA3.1(-)-SULF1 CA | This paper | | Transfected construct for enzyme inactivated SULF1 expression (human) |
Antibody | ß-Actin | Santa Cruz Biotechnology (mouse monoclonal) | sc-47778 RRID:AB_626632 | WB 1:10000 |
Antibody | pAKT | Cell Signaling Technology (rabbit polyclonal) | sc-7985-R RRID:AB_2861344 | WB 1:1000 |
Antibody | AKT | Cell Signaling Technology (rabbit polyclonal) | #9272 RRID:AB_329827 | WB 1:1000 |
Antibody | pCMET | Cell Signaling Technology (rabbit polyclonal) | #3077 RRID:AB_2143884 | IHC: 1:100 WB 1:1000 |
Antibody | pCMET | ABclonal (rabbit polyclonal) | AP0533 RRID:AB_2771334 | WB 1:1000 |
Antibody | CMET | Cell Signaling Technology (rabbit polyclonal) | #8198 RRID:AB_10858224 | WB 1:1000 |
Antibody | CD44v6 | R&D systems Technology (mouse monoclonal) | BBA13 RRID:AB_356935 | WB 1:1000 |
Antibody | pERK 1/2 | Genetex Biotechnology (rabbit polyclonal) Cell Signaling Technology (rabbit polyclonal) | GTX59568 RRID:AB_10731702 #9101 RRID:AB_331563 | WB 1:1000 |
Antibody | ERK 1/2 | Cell Signaling Technology (rabbit monoclonal) | #4695 RRID:AB_390779 | WB 1:1000 |
Antibody | H3K27me3 | Cell Signaling Technology (rabbit polyclonal) Abcam (mouse monoclonal) | #9733 RRID:AB_2616029 ab6002 RRID:AB_305237 | WB 1:1000 |
Antibody | Histone 3 | Genetex Biotechnology (rabbit polyclonal) Cell Signaling Technology (rabbit polyclonal) | GTX122148 RRID:AB_10633308 #9715 RRID:AB_331563 | WB 1:1000 |
Antibody | pP38 | Cell Signaling Technology (rabbit polyclonal) | #9211 RRID:AB_331641 | WB 1:1000 |
Antibody | P38 | Santa Cruz Biotechnology (rabbit polyclonal) | sc-7149 RRID:AB_653716 | WB 1:1000 |
Antibody | SULF1 | Abcam (rabbit polyclonal) | ab327 RRID:AB_882749 63 | IHC: 1:100 WB 1:1000 |
Antibody | EZH2 | Cell Signaling Technology (rabbit polyclonal) | #3147 RRID:AB_10694383, #5246 RRID:AB_10694683 | IHC: 1:100 WB 1:1000 |
Antibody | 10E4 | Amsbio (mouse monoclonal) | #370255 S RRID:AB_10891554 | WB 1:1000 |
Antibody | Secondary antibody-HRP conjugated | Bioss antibodies (Goat polyclonal) | BS-0368G-HRP RRID:AB_10890902 | WB 1:5000 |
Antibody | Secondary antibody-HRP conjugated | Mouse IgG antibody (HRP) (Rabbit polyclonal) | GTX213112-01 RRID:AB_10617557 | 1:5000 |
Antibody | Secondary antibody-HRP conjugated | Rabbit IgG antibody (HRP) (Goat polyclonal) | GTX213110-01 RRID:AB_10618573 | 1:4000 |
Sequence-based reagent | EZH2-q-F | This paper | qPCR-Primers | 5'-CAGTTCGTGCCCTTGTGTGA-3' |
Sequence-based reagent | EZH2-q-R | This paper | qPCR-Primers | 5'-GCACTGCTTGGTGTTGCACT-3' |
Sequence-based reagent | SULF1-q-F | This paper | qPCR-Primers | 5’CAAGGAGGCTGCTCAGGAAG3’ |
Sequence-based reagent | SULF1-q-R | This paper | qPCR-Primers | 5’CATGCGTGAAGCAAGTGAGG3’ |
Sequence-based reagent | q-ChIP-SULF1-F-P | This paper | qPCR-Primers | 5’CGCATGCGGAATGACAACAG3’ |
Sequence-based reagent | q-ChIP-SULF1-R-P | This paper | qPCR-Primers | 5’CTCAGTTCAAATCCCGCCTC3’ |
Chemical compound and drug | Capmatinib | Selleckchem | INCB28060 | For pCMET inhibition |
Chemical compound and drug | Crizotinib | Sigma | PZ0191 | For pCMET inhibition |
Chemical compound and drug | EPZ-6438 | MCE | HY-13803 | For EZH2 enzyme activity inhibition |
Chemical compound and drug | GSK343 | Sigma | SML0766 | For EZH2 enzyme activity inhibition |
Chemical compound and drug | G418 (Geneticin) | InvivoGen | Anti-gn-1 | For stable cell line selection |
Chemical compound and drug | Tivantinib | Selleckchem | S2753 | For pCMET inhibition |
Commercial assay and kit | Human RTK array | R&D Systems | ARY001B | For human RTK receptor detection |
Commercial assay and kit | MTS | Promega | RG3580 | For cell proliferation detection |
Commercial assay and kit | MTT | InvivoGen | M6494 | For cell proliferation detection |
Commercial assay and kit | SYBR green | Roche | KK4600 | For mRNA detection |
Commercial assay and kit | Antigen retrieval solution | Abcam | ab970 | For antigen retrieval |
Commercial assay and kit | Lipofectamine | Invitrogen | 11668019 | |
Commercial assay and kit | TransITR-2020 | Mirus | MS-MIR5400 | |
Commercial assay and kit | Jet PRIME | Polyplus | PO-114–15 | |
Software | Image Lab | Bio-Rad Laboratories | RRID:SCR_014210 | For WB image analysis |
Software | BD FACSuite v1.0.6 | BD bioscience | | For FACS analysis |
Software | IVIS Spectrum In Vivo Imaging System | PerkinElmer | | For in vivo tumour analysis |
Software and algorithm | PRISM | GraphPad Software | RRID:SCR_002798 | For survival analysis and bargraph |
Software and algorithm | Image scope | Leica | | For IHC H score quantification |
Other | Bone cancer tissue array | US Biomax | B0481 | Chondrosarcoma IHC staining |
Other | Bone cancer tissue array | US Biomax | B0481a | Chondrosarcoma IHC staining |
Other | Normal cartilage tissue array | From bone surgeon Dr.Teng-Le Huang | | Primary cartilage tissue IHC staining |