Abstract
The evolutionary introduction of asymmetric cell division (ACD) into the developmental program facilitates the formation of a new cell type, contributing to developmental diversity and, eventually, to species diversification. The micromere of the sea urchin embryo may serve as one of those examples: An ACD at the 16-cell stage forms micromeres unique to echinoids among echinoderms. We previously reported that a polarity factor, Activator of G-protein Signaling (AGS), plays a crucial role in micromere formation. However, AGS and its associated ACD factors are present in all echinoderms and across most metazoans, leaving a question of what evolutionary modification of AGS protein or its surrounding molecular environment contributed to the evolutionary acquisition of micromeres only in echinoids. In this study, we learned that the GoLoco motifs at the AGS C-terminus play critical roles in regulating micromere formation in sea urchin embryos. Further, other echinoderms’ AGS or chimeric AGS that contain the C-terminus of AGS orthologs from various organisms showed varied localization and function in micromere formation. In contrast, the sea star or the pencil urchin orthologs of other ACD factors were consistently localized at the vegetal cortex in the sea urchin embryo, suggesting that AGS may be a unique variable factor that facilitates ACD diversity among echinoderms. Consistently, sea urchin AGS appears to facilitate micromere-like cell formation and accelerate the enrichment timing of the germline factor Vasa during early embryogenesis of the pencil urchin, an ancestral type of sea urchin. Based on these observations, we propose that the molecular evolution of a single polarity factor facilitates ACD diversity while preserving the core ACD machinery among echinoderms and beyond during evolution.
Highlights
Evolutionary modifications of GoLoco motifs are critical for AGS function in micromere formation in the sea urchin embryo.
The chimeric AGS, which contains the C-terminus of AGS orthologs from various organisms, suggests that human LGN, pencil urchin AGS, and Drosophila Pins compensate for the activity of sea urchin AGS.
Sea urchin AGS regulates the localization of the conserved asymmetric cell division (ACD) machinery members at the vegetal cortex.
SpAGS is a variable factor facilitating ACD diversity during species diversification.
Introduction
Asymmetric cell division (ACD) is a developmental process that facilitates cell fate diversification by distributing fate determinants differently between daughter cells. It is an essential process for multicellular organisms since it creates distinct cell types, leading to different tissues in an organism. For example, in Drosophila, embryonic neuroblasts divide asymmetrically to produce apical self-renewing neuroblasts and basal ganglion mother cells (Bate, 1978; Doe, 2008; Doe et al., 1988; Hartenstein & Campos-Ortega, 1984). In C. elegans, the zygote divides asymmetrically to form a large anterior and a small posterior blastomere with distinct cell fates (Schnabel et al., 1996; Sulston et al., 1983; Watts et al., 1996). In mammals, neuroepithelial cells undergo ACD to produce apical self-renewing stem cells as well as basal neural progenitor cells (Chenn & McConnell, 1995; Haydar et al., 2003; Konno et al., 2008; Noctor et al., 2004). A set of polarity factors conserved across phyla regulates these highly organized ACD processes. However, the timing and location of such controlled ACD often occur randomly, even within the same phylum, providing uniqueness to the developmental program of each species. Therefore, we hypothesize that drastic changes in the ACD machinery are unnecessary. Instead, a slight modification in the ACD machinery may drive the formation of a new cell type and the change in the developmental program, contributing to species diversification in the process of evolution.
In this study, we use echinoderm embryos as a model system to test this hypothesis. Echinoderms are basal deuterostomes and include sea urchins, sea stars, and sea cucumbers, among others. In the well-studied echinoderm models, the sea urchin and sea star embryos, the first ACD or symmetry break occurs at the 8-cell stage, where a horizontal cell division separates animal and vegetal blastomeres that contribute to ectoderm and endomesoderm lineages, respectively (Fig. 1A). However, in the next cell cycle at the 16-cell stage, the sea urchin embryo undergoes an apparent unequal cell division, producing four micromeres at the vegetal pole. In contrast, the sea star embryo undergoes seemingly an equal cell division (Fig. 1B).
The micromere formation in the sea urchin embryo is a highly controlled ACD event since this cell lineage undergoes autonomous cell specification and functions as organizers as soon as it is formed at the 16-cell stage (Horstadius, 1928; Ransick & Davidson, 1993). For example, micromeres autonomously divide asymmetrically again to produce large and small micromeres that are committed to two specific lineages of skeletogenic cells and the germline, respectively, at the 32-cell stage (Okazaki, 1975; Yajima & Wessel, 2011). This early segregation of the germline is unique to sea urchins among echinoderms (Juliano et al., 2009; Fresques et al., 2016). Further, micromeres induce endomesoderm specification (e.g., gastrulation) even when they are placed in the ectopic region of the embryo, such as the animal cap, suggesting they function as a major signaling center in this embryo (Horstadius, 1928; Ransick & Davidson, 1993). The removal of sea urchin micromeres results in compromised or delayed endomesoderm development and compensatory upregulation of a germline factor, Vasa, to presumably start over the developmental program (Ransick & Davidson, 1993; Voronina et al., 2008).
In contrast, other echinoderms undergo minor unequal cell divisions during early embryogenesis, yet they may not be linked to specific cell fate or function. For example, in sea star embryos, the removal of smaller cells does not impact embryonic patterning, and unequal cell divisions appear to be not necessarily linked to specific cell fate regulation or function (Barone et al., 2022). Similarly, even in sea urchin embryos, the non-micromere blastomeres at the 16-cell stage can change the cell fate in response to external cues, including the signaling from micromeres. Recent studies using single-cell RNA-seq analysis further support these observations by demonstrating the earlier molecular segregation of the micromere lineage, while other cell lineages appear to undergo more regulative development (Foster et al., 2019; Massri et al., 2021).
Fossil records and phylogenetic tree analysis suggest that sea urchins diverged relatively later from the common ancestor of echinoderms (Bottjer et al., 2006; Wada and Sato et al., 1994). Since micromeres are unique to echinoids (sea urchins, sand dollars, pencil urchins), they are considered to have emerged later during sea urchin diversification, which has dramatically changed the developmental style in the sea urchin embryo (Emura and Yajima, 2022). To understand how this unique lineage has emerged during evolution, we previously identified the Activator of G-protein signaling (AGS) (Pins in Drosophila; LGN in mammals) as a major regulator of micromere formation (Poon et al., 2019). AGS is a polarity factor and plays a role in the ACD of many organisms (reviewed by di Pietro et al., 2016; Kotak, 2019; Rose & Gonczy, 2014; Siller & Doe, 2009; Wavreil & Yajima, 2020; Yu et al., 2006). In the sea urchin (S. purpuratus; Sp), SpAGS localizes to the vegetal cortex before and during micromere formation, and its knockdown inhibits micromere formation (Poon et al., 2019). On the other hand, in the sea star (P. miniata; Pm), PmAGS shows no cortical localization nor any significant role in ACD during early embryogenesis. Furthermore, the pencil urchin (E. tribuloides; Et) is an ancestral type of the sea urchin and diverged around 252 million years ago, which is located between the sea star and the sea urchin. The Et embryo exhibits an intermediate developmental program of the sea urchins and sea stars. It stochastically forms zero to four micromere-like cells (Fig. 1B). In these embryos, EtAGS localizes to the vegetal cortex only when the embryos form micromere-like cells (Poon et al., 2019), suggesting a close correlation between cortical AGS localization and micromere-like cell formation.
Furthermore, the introduction of sea urchin AGS into sea star embryos induces random unequal cell divisions by recruiting the spindle poles to the cortex (Poon et al., 2019), suggesting that SpAGS facilitates unequal cell divisions even in other echinoderm species. Phylogenetic analysis of AGS orthologs across taxa suggests that AGS orthologs increased the functional motif numbers over the course of evolution, likely allowing additional molecular interactions and mechanisms to modulate ACD in a more nuanced manner in higher-order organisms (Wavreil and Yajima, 2020). Supporting this hypothesis, indeed, prior studies suggest that the higher-order mouse AGS ortholog (LGN) can substitute for its fly ortholog (Pins) in Drosophila cells, while the basal-order fly Pins cannot substitute its chick ortholog function in chick, the higher-order organism (Yu et al., 2003; Saadaouri et al., 2017). These observations led us to hypothesize that the molecular evolution of AGS orthologs drives ACD diversity across taxa, contributing to the developmental diversity within each phylum. In this study, through a series of molecular dissection experiments, we demonstrate that the AGS C-terminus is a variable region and creates its functional diversity in ACD control, facilitating the developmental variations among echinoderms. This study provides insight into how the molecular evolution of a single polarity contributes to developmental diversity within each phylum.
Results
The N-terminal TPR domain is vital for restricting SpAGS localization and function at the vegetal cortex
AGS consists of two functional domains: the N-terminus contains tetratricopeptide repeats (TPR), and the C-terminus contains G-protein regulatory motifs (GoLoco, GL) (Bernard et al., 2001). AGS switches between a closed and open structure based on the intramolecular interaction between the TPR and GL motifs (Du & Macara, 2004; Johnston et al., 2009; Nipper et al., 2007; Pan et al., 2013). The TPR motifs regulate protein-protein interaction with various partners such as Inscuteable (Insc) for its proper cortical localization or Nuclear Mitotic Apparatus (NuMA) for its microtubule-pulling force generation. In contrast, the GL motifs interact with the heterotrimeric G-protein subunit Gαi for its anchoring to the cortex (Bowman et al., 2006; Culurgioni et al., 2011; Culurgioni et al., 2018; Du & Macara, 2004; Parmentier et al., 2000; Wang et al., 2011; Yu et al., 2000). Studies investigating AGS mechanisms in fly and mammals reveal that Pins/LGN (AGS orthologs) generally remain in the autoinhibited form in the cell (Du & Macara, 2004; Johnston et al., 2009; Nipper et al., 2007) (Fig. 1C). At the time of ACD, Insc recruits Pins/LGN to the cortex through Gαi. This Gαi-binding releases Pins/LGN from its autoinhibition and allows it to interact with NuMA, which recruits the motor protein dynein to generate pulling forces on the microtubules and facilitate ACD (Bowman et al., 2006; Culurgioni et al., 2011; Izumi et al., 2006; Parmentier et al., 2000; Schaefer et al., 2001; Siller et al., 2006; Williams et al., 2014; Yu et al., 2000; Yuzawa et al., 2011; Zhu et al., 2011a).
To test whether sea urchin (S. purpuratus; Sp) AGS functions in ACD similarly to its orthologs, we first investigated the role of its N-terminus by constructing a series of GFP-tagged deletion mutants (Fig. 2A; Fig. S1). AGS-1F is missing the first three TPR motifs, AGS-2F the first four, and AGS-3F the entire TPR domain of SpAGS Open Reading Frame (ORF). The mRNA for these deletion constructs was co-injected with 2x-mCherry-EMTB, a microtubule marker, to visualize the cell cycle phase, spindle location, and orientation. We counted the number of embryos with vegetal cortical localization and conducted a quantitative analysis by measuring the ratio of cortical and non-cortical signal intensity at the 16∼32-cell stage (Fig. 2B-C). Embryos injected with full-length SpAGS (Full AGS) or AGS-1F exhibited vegetal cortex-specific localization. In contrast, AGS-2F and AGS-3F showed uniform cortical localization (Fig. 2B-C). These results suggest that TPR4-6 is necessary for restricting AGS to the vegetal cortex, whereas TPR1-3 appears to play a less critical role in controlling AGS localization.
In the control and the AGS-1F groups, micromeres were approximately half the size of the macromeres. In contrast, they were three-quarters the size in the AGS-2F group and almost the same size in the AGS-3F group (Fig. 2D-E), resulting in failed micromere formation even in the presence of the endogenous SpAGS (Fig. 2F). In these embryos, we also scored embryonic development at two days post fertilization (2 dpf) when gastrulation occurs. The AGS-1F mutant mostly showed normal development with extended skeletal rods, whereas AGS-2F and AGS-3F dramatically compromised development with incomplete skeleton extension or gut formation (Fig. 2G-H). Since these N-terminal deletions appear to cause a dominant negative phenotype, we did not knock down endogenous SpAGS in these experiments.
These results suggest that the N-terminal TPR domain is necessary to restrict SpAGS localization at the vegetal cortex. The TPR deletion disables AGS mutants from maintaining the autoinhibited form. It may thus induce their binding to Gαi at every cortex and compete out the endogenous SpAGS at the vegetal cortex. Notably, Gαi localization was also recruited to the exact ectopic location as AGS-2F and -3F mutants (Fig. 2I), suggesting that the SpAGS C-terminus is sufficient to control the Gαi localization at the vegetal cortex. Protein sequences of AGS orthologs across echinoderms are almost identical in their N-termini, suggesting that the AGS N-terminus serves as a core functional domain (Fig. S2). In contrast, the AGS C-terminus appears highly variable across echinoderms.
The C-terminal GL1 motif is essential for SpAGS localization and function in ACD
To test whether a variable AGS C-terminus creates functional diversity in ACD, we made a series of GFP-tagged C-terminus deletion SpAGS mutants that are missing different GL motifs (Fig. 3A). SpAGS mutants missing GL1 (ΔGL1), GL3 (ΔGL3) or all GL motifs (ΔGL1-4) failed to localize at the vegetal cortex compared to the Full AGS control (Fig. 3B-D), suggesting that GL1 and GL3 are essential for cortical localization of AGS. Next, we knocked down endogenous AGS by morpholino antisense oligonucleotides (MO), which was previously validated for the specificity (Poon et al., 2019). We tested whether these deletion mutants could rescue micromere formation (Fig. 3E). The GL1 deletion significantly reduced micromere formation. In contrast, the GL2, GL3, or GL4 deletion showed no or little significant difference in micromere formation compared to the Full AGS control group (Fig. 3F). Consequently, the GL1 deletion showed significant disruption in embryonic development at 2 dpf, likely due to a lack of micromeres’ inductive signaling at the 16-cell stage (Fig. 3G-H).
These results suggest GL1 is critical for both AGS localization and function at the vegetal cortex for micromere formation. GL3 and GL4 are important for intramolecular binding to the TPR domain in other organisms, which may impact the proper open-close control of AGS protein (Du & Macara, 2004; Johnston et al., 2009; Nipper et al., 2007; Pan et al., 2013).
The position of GL1 is important for SpAGS function in ACD
To determine whether the sequence or positioning of GL1 is essential for the SpAGS function, we next made a series of mutants where the GL motifs were interchanged or replaced (Fig. 4A). For instance, AGS1111 has all GL motifs replaced with the sequence of GL1, whereas AGS4234 has the sequence of GL1 replaced with that of GL4. Most embryos that formed micromeres displayed vegetal cortical localization for all mutants except for AGS1111 and AGS2222, which severely inhibited micromere formation (Fig. 4B-C). A small portion (4.14% ± 2.65, n=170) of AGS2222 embryos formed micromeres and always showed vegetal cortical localization, suggesting that AGS localization and micromere formation are closely linked to each other. Additionally, most of all AGS1111 embryos (99.36% ± 0.64, n=182) and of AGS2222 (98.06% ± 1.94, n=170) displayed ectopic cortical localization around the entire embryo (Fig. 4B). We did not observe this phenotype in the Full AGS control nor the other two mutants (AGS2134 and AGS4234).
We quantified the function of these AGS mutants in the endogenous AGS-knockdown background. AGS1111 and AGS2222 mutants failed to restore micromere formation at the 16-cell stage, while AGS4234 and AGS2134 mutants rescued micromere formation similarly to Full AGS (Fig. 4D). Furthermore, Full AGS, AGS2134, and AGS4234 showed comparable development at 2 dpf. In contrast, the AGS1111 and AGS2222 showed disrupted development (Fig. 4E-F). These results suggest that the GL1 sequence is not essential, but its position is vital. In contrast, the sequence of GL3 or GL4 appears to be critical for restricting AGS localization to the vegetal cortex, perhaps by maintaining the autoinhibited form of AGS through their interaction with the TPR domains. AGS1111 and AGS2222 mutants were thus unable to sustain a closed/inactive state, resulting in a constitutively active form all around the cortex.
To test this model further, we made two additional SpAGS mutants, AGS4444 and AGS-GL1GL2 (Fig. 4G). AGS4444 localized properly at the vegetal cortex, whereas AGS-GL1GL2 showed significantly fewer embryos with vegetal cortical localization (Fig. 4H-I). Furthermore, AGS-GL1GL2 showed impaired function in micromere formation and development compared to Full AGS control (Fig. 4J-K). On the other hand, AGS4444 showed no significant difference in the proportion of embryos with micromeres at the 16-cell stage and normal development at 2 dpf compared to the Full AGS control. These results further support the contention that GL3 and GL4 are essential for maintaining the SpAGS in a closed form. Additionally, the position of GL1 is critical for SpAGS localization and function.
The molecular evolution of the AGS C-terminus facilitates the ACD diversity among AGS orthologs
To understand if/how SpAGS functions uniquely compared to other echinoderm AGS orthologs, we cloned sea star (P. miniata; Pm) and pencil urchin (E. tribuloides; Et) AGS into the GFP-reporter construct (Fig. 5A) and introduced them into the sea urchin zygotes. EtAGS showed no significant difference compared to the SpAGS control, while PmAGS failed in vegetal cortical localization and micromere formation and function (Fig. 5B-E). Hence, PmAGS is incapable of inducing micromere formation.
Since the N-terminal sequences of SpAGS and PmAGS are almost identical (Fig. S2), we hypothesize that the variable C-terminus made a difference in AGS localization and function at the vegetal cortex. To test this hypothesis, we constructed a series of chimeric SpAGS mutants that replaced its C-terminus with that of other AGS orthologs (Fig. 5F). These AGS orthologs include human LGN, Drosophila (Dm) Pins, and EtAGS, which are all involved in ACD (Gonczy, 2008; Schaefer et al., 2000; Wavreil & Yajima, 2020; Zhu et al., 2011a, 2011b) as well as human AGS3 and PmAGS, neither of which is involved in ACD (Saadaoui et al., 2017).
The chimeras of ACD-facilitating orthologs (EtGL, LGNGL, DmGL) showed no significant difference in the vegetal cortical localization and micromere function compared to the SpAGS control (Fig. 5G-J). In contrast, chimeras of no-ACD-facilitators (AGS3GL and PmGL) failed in micromere formation and function. These results suggest that the AGS C-terminus creates ACD diversity by largely reflecting the original function of each ortholog in the host species. Of note, Drosophila Pins chimera (DmGL) showed reduced micromere formation (Fig. 5I), which may be due to fewer functional domains with reduced efficacy in the higher-order organism (Wavreil and Yajima, 2020).
Additionally, AGS-PmGL unexpectedly showed cortical localization (Fig. 5G), while PmAGS showed no cortical localization (Fig. 5B). This result suggests that other elements of SpAGS outside of its C-terminus can drive its vegetal cortical localization but not function. Aurora A phosphorylates the linker serine region, enabling Dlg to bind and activate Pins in Drosophila (Johnston et al., 2009). To test if this serine is essential for SpAGS localization, we mutated it to alanine (AGS-S389A in Fig. S3A). Compared to the Full AGS control, the mutant AGS-S389A showed reduced vegetal cortical localization (Fig. S3B-C) and function (Fig. S3D-E). Furthermore, we replaced the linker region of PmAGS with that of SpAGS (PmAGS-SpLinker in Fig. S4A-B). However, this mutant did not show any cortical localization nor proper function in ACD (Fig. S4C-F). Therefore, the SpAGS C-terminus is the primary element that drives ACD, while the linker region serves as the secondary element to help cortical localization of AGS.
Lastly, in humans, it is proposed that the interdomain sequence between GL2 and GL3 is important for intramolecular interaction with TPR through phosphorylation, mediating the autoinhibitory state of LGN differently from that of AGS3 (Takayanagi et al., 2019). To test this possibility, we made mutants targeting the residues unique to the AGS3 GL2-GL3 interdomain region (green and red residues in Fig. S5): three serine residues were mutated to alanine, and three other residues (G, N, Y) were replaced with the corresponding residues of LGN. Consistent with our hypothesis, the chimera replaced with the LGN residues (AGS3GL-GL2GL3) gained the proper localization and function, while the chimera with serine alterations (AGS3GL-3S/A) failed to function in ACD (Fig. S3C-E). These results suggest that specific amino acid residues within the GL3 motif are critical, likely mediating interaction with TPR domains and the autoinhibited state of AGS. This result aligns with the earlier results of AGS1111 and AGS2222, which failed in ACD. On the other hand, potential serine phosphorylation between GL2-GL3 motifs appears to be irrelevant to the AGS function.
Overall, we conclude that the variable C-terminus of AGS orthologs facilitates ACD diversity. At the same time, the N-terminus and the linker region of AGS appear to help mediate its autoinhibited state, which regulates its cortical localization (summary diagrams in Fig. 6).
SpAGS is a dominant factor for micromere formation
Since AGS is a part of the conserved ACD machinery, we next sought to understand how dominant SpAGS is for micromere formation. The other conserved ACD factors include Insc, Dlg, NuMA, and Par3 (Fig. 1C). Insc controls cortical localization of Pins and LGN in flies and humans, respectively (Schaefer et al., 2000; Williams et al., 2014; Yu et al., 2000; Culurgioni et al., 2011; Culurgioni et al., 2018). Dlg appears to bind to the phosphorylated linker domain of Pins, which recruits microtubules to the cortex in flies (Johnston et al., 2009; Siegrist & Doe, 2005). NuMA (Mud in Drosophila) interacts with LGN/Pins to generate pulling forces on the microtubules in humans and flies. Par3 (Baz in Drosophila) is part of the PAR complex with Par6 and aPKC and binds to Insc to help localize LGN/Pins at the cortex (Culurgioni et al., 2011; Parmentier et al., 2000; Schaefer et al., 2000; Schober et al., 1999; Wodarz et al., 2000; Yu et al., 2000).
We cloned the sea urchin orthologs of these ACD factors and tagged each ORF with a GFP reporter. All ACD factors showed precise vegetal cortical localization during or upon micromere formation by GFP live imaging or immunofluorescence (Fig. 7A and S6). Furthermore, we tested for physical interaction by performing the proximity ligation assay (PLA) for AGS and ACD factors (Insc, NuMA, Dlg). The results suggest these factors physically interact with AGS at the vegetal cortex (Fig. 7B). Hence, the core ACD machinery is present at the vegetal cortex and interacts with AGS. We also observed AGS interacting with a fate determinant, Vasa, that is known to be enriched in micromeres at the vegetal cortex (Fig. 7B) (Voronina et al., 2008). These results indicate that AGS may recruit both ACD factors and fate determinants to the vegetal cortex, directly facilitating rapid lineage segregation of micromeres.
Consistent with this observation, SpAGS knockdown reduced the signal enrichment of ACD factors and another fate determinant of micromeres, β-catenin (Logan et al., 1999) (Fig. 7C-H). Furthermore, in our previous study (Poon et al., 2019), we identified that SpAGS recruits the spindle poles to every cortex when overexpressed (Fig. S7A, arrows). Similarly, SpAGS at least partially recruits its partner proteins to the ectopic cortical region, which we never observed in the control group (Fig. S7B-C, arrows). These results support the idea that SpAGS directly recruits the molecules essential for micromere lineage segregation. Indeed, in situ hybridization (ISH) analysis suggests that the downstream genes regulated by micromere signaling, such as endomesoderm marker genes (wnt8, foxa, blimp1b, and endo16), decreased their expression territories in the AGS-knockdown embryos (Fig. 8). In contrast, ectoderm (foxq2) and skeletogenic mesoderm (ets1, alx1, tbr1, and sm50) marker genes showed no significant change in their expressions by AGS knockdown. Overall, these results suggest that SpAGS directly recruits multiple ACD factors and fate determinants necessary for micromere formation and function as an organizer, facilitating the downstream gene expressions necessary for endomesoderm specification.
AGS serves as a variable factor in the conserved ACD machinery
AGS shows a variable C-terminal domain and appears to be a primary factor for facilitating ACD diversity. However, is AGS the only variable factor among the ACD machinery? To test this question, we cloned and injected orthologs of other ACD factors, such as Insc and Dlg, from pencil urchins (Et) or sea stars (Pm) into sea urchins. Both Insc and Dlg showed relatively conserved functional domains among three echinoderms with an extra PDZ domain present in PmDlg (Fig. 9A-B; S8-9). Importantly, these Pm and Et ACD factors showed cortical localization at the vegetal cortex in the sea urchin embryo (Fig. 9C-F). These results are in stark contrast to the earlier results of Pm/Et AGS, which showed varied localization and function in ACD. Therefore, Insc and Dlg might not be the significant variable factors.
To determine how dominantly SpAGS facilitates ACD diversity, we introduced SpAGS, EtAGS, or PmAGS into the pencil urchin, an ancestral type of sea urchin, and compared their function. We co-introduced Vasa-mCherry to identify the development of the germline, which is one of the micromere descendants. Pencil urchin embryos typically form 0-4 micromere-like cells randomly (Fig. 10A). Notably, only SpAGS injection increased the formation of micromere-like cells in the resultant pencil urchin embryos. In contrast, EtAGS and PmAGS showed no significant difference from the negative control (Vasa-mCherry only, Fig. 10B). This result suggests that SpAGS increases the frequency of micromere-like cell formation in pencil urchin embryos.
Sea urchin embryos show Vasa enrichment in micromeres at the 16-cell stage. In contrast, pencil urchin embryos show such enrichment later in the larval stage (3-4 dpf), which is more similar to the timing of the germline segregation in sea star embryos (Juliano & Wessel, 2009). We observed that SpAGS increased the Vasa signal enrichment in micromere-like cells compared to the control (Vasa-mCherry only) at the 16-cell stage. On the other hand, other AGS orthologs showed no significant difference from the control (Fig. 10C-D). Nearly 80% (80.12% ± 3.75) of the SpAGS-introduced embryos showed co-enrichment of AGS and Vasa in micromere-like cells, while the EtAGS and PmAGS groups showed only 49.2% ± 8.94 and 43.37% ± 3.94 enrichment, respectively (Fig. 10E). Consistently, the SpAGS group showed the earlier segregation of Vasa-positive cells similar to sea urchin embryos at 1 dpf (Fig. 10F-G), potentially accelerating the lineage segregation of the pencil urchin embryo.
Discussion
The introduction of ACD in early embryogenesis of the sea urchin led to the formation of a new cell type, micromeres, with a critical organizer function. In the sea urchin, SpAGS is essential for micromere formation, while other echinoderm embryos show no cortical AGS localization (Poon et al., 2019). This study demonstrates that the GL1 motif of SpAGS is key for its vegetal cortical localization and function in micromere formation.
Importantly, this unique role of the GL1 motif appears to be conserved across organisms. In Drosophila Pins and humans LGN, GL1 is free from TPR binding, making it essential for the recruitment of Pins/LGN to the cortex (Nipper et al., 2007; Takayanagi et al., 2019). Thus, the evolutionary introduction of the GL1 motif into SpAGS likely increased recruitment affinity to the vegetal cortex, inducing ACD in the sea urchin embryo.
The GL1 deletion significantly disrupted micromere formation, while its replacement with other GL motifs had no effect. Therefore, the GL1 position rather than the sequence is essential for SpAGS function in ACD regulation. In contrast, GL3 and GL4 sequences are crucial for SpAGS activity, which also appears to be conserved across organisms. In Drosophila Pins and human LGN, GL2-3 and GL3-4 sequences, respectively, are essential for their intramolecular interactions with TPR motifs, which control Pins/LGN’s autoinhibited conformation (Nipper et al., 2007; Pan et al., 2013; Smith & Prehoda, 2011; Takayanagi et al., 2019). In a closed conformation, Pins/LGN are unable to bind to Mud/NuMA. Therefore, Gαi binding to GL1 relieves the autoinhibition (Du & Macara, 2004; Nipper et al., 2007; Takayanagi et al., 2019; Pan et al., 2013). Indeed, the TPR4-6 motifs are necessary to restrict SpAGS localization to the vegetal cortex, suggesting their interactions with GL motifs to maintain autoinhibition.
While the role of AGS protein in spindle orientation has been established in several model organisms, it was unknown if or how far AGS could regulate the fate determinants to facilitate ACD diversity. In this study, we learned that SpAGS is essential for the recruitment of ACD factors, such as Insc and NuMA, and fate determinants, such as Vasa and β-catenin, to micromeres. Notably, in pencil urchin embryos, SpAGS recruited Vasa protein into micromeres, suggesting SpAGS may be sufficient to recruit necessary fate determinants to create cell lineage segregation in another species. Although such a lineage segregation of micromeres may be mediated solely by ACD, their function as organizers might require additional changes in the developmental program of the entire embryo. For example, sea urchin embryos have a robust hyaline layer to keep blastomeres together, which presumably increases the cell-cell interaction and may also enhance cell signaling during early embryogenesis. In contrast, a hyaline layer is not or little present in sea star or pencil urchin embryos, respectively. At present, we do not know what developmental changes are upstream or downstream of micromere formation during sea urchin diversification. It will be important to identify in the future how far SpAGS impacts the developmental program other than inducing ACD and what other developmental elements play critical roles in establishing micromeres as a new cell lineage and organizers during sea urchin diversification.
Overall, we conclude that the GL1 motif unique to sea urchin AGS orthologs is critical for SpAGS function in micromere formation. Since the unique role of the GL1 motif appears to be conserved across organisms, including Drosophila and humans, it is possible that the GL1 motif was once lost in the echinoderm common ancestor and recovered during sea urchin diversification. The recovery of this GL1 motif also resumed the interaction between SpAGS and other ACD machinery, such as NuMA, Insc, and Dlg, at the cortex in a similar manner to its orthologs Pins and LGN in other phyla, resulting in the controlled ACD and further interactions with fate determinants to form a new cell type in the sea urchin embryo. Therefore, unlike random unequal cell divisions that do not alter cell fates, AGS-mediated cell divisions appear to be highly organized and may be programmed to cause cell fate changes. Considering great variations within the C-terminus of AGS orthologs and their immediate impact on micromere formation, we propose that AGS is a variable factor in facilitating ACD diversity among echinoderm embryos, contributing to developmental diversity within a phylum. Future studies in other taxa are awaited to prove this concept further.
Acknowledgements
We would like to thank Mr. Ronit Sethi for providing assistance in identifying the optimal conditions for AGS-MO and OE experiments. N.E. and F.D.M.W. were responsible for the concept, experimental design and undertaking, data analysis, and manuscript construction and editing regarding all bioinformatics analyses; A.F. was responsible for initial conceptualization, experimental design, undertaking, and data analysis; M.Y. was responsible for concepts, experimental design and undertaking, data analysis, manuscript construction, and editing for all sections.
Funding
This work was supported by NSF (IOS-1940975) and NIH (1R01GM126043-01)
References
- 1.Development of Sensory Systems in ArthropodsHandbook of Sensory Physiology :1–53https://doi.org/10.1007/978-3-642-66880-7_1
- 2.Selective interaction of AGS3 with G-proteins and the influence of AGS3 on the activation state of G-proteinsJ Biol Chem 276:1585–1593https://doi.org/10.1074/jbc.M005291200
- 3.The Drosophila NuMA Homolog Mud regulates spindle orientation in asymmetric cell divisionDev Cell 10:731–742https://doi.org/10.1016/j.devcel.2006.05.005
- 4.Cleavage orientation and the asymmetric inheritance of Notch1 immunoreactivity in mammalian neurogenesisCell 82:631–641https://doi.org/10.1016/0092-8674(95)90035-7
- 5.Inscuteable and NuMA proteins bind competitively to Leu-Gly-Asn repeat-enriched protein (LGN) during asymmetric cell divisionsProc Natl Acad Sci U S A 108:20998–21003https://doi.org/10.1073/pnas.1113077108
- 6.Insc:LGN tetramers promote asymmetric divisions of mammary stem cellsNat Commun 9https://doi.org/10.1038/s41467-018-03343-4
- 7.Regulation of mitotic spindle orientation: an integrated viewEMBO Rep 17:1106–1130https://doi.org/10.15252/embr.201642292
- 8.Neural stem cells: balancing self-renewal with differentiationDevelopment 135:1575–1587https://doi.org/10.1242/dev.014977
- 9.Expression and function of the segmentation gene fushi tarazu during Drosophila neurogenesisScience 239:170–175https://doi.org/10.1126/science.2892267
- 10.Mammalian Pins is a conformational switch that links NuMA to heterotrimeric G proteinsCell 119:503–516https://doi.org/10.1016/j.cell.2004.10.028
- 11.Divergence of ectodermal and mesodermal gene regulatory network linkages in early development of sea urchinsProc Natl Acad Sci U S A 113:E7202–E7211https://doi.org/10.1073/pnas.1612820113
- 12.Evolutionary rewiring of gene regulatory network linkages at divergence of the echinoid subclassesProc Natl Acad Sci U S A 112:E4075–4084https://doi.org/10.1073/pnas.1509845112
- 13.Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoidsDevelopment 145https://doi.org/10.1242/dev.167288
- 14.Vasa nucleates asymmetric translation along the mitotic spindle during unequal cell divisionsNat Commun 13https://doi.org/10.1038/s41467-022-29855-8
- 15.Mechanisms of asymmetric cell division: flies and worms pave the wayNat Rev Mol Cell Biol 9:355–366https://doi.org/10.1038/nrm2388
- 16.Early neurogenesis in wild-typeDrosophila melanogasterWilehm Roux Arch Dev Biol 193:308–325https://doi.org/10.1007/bf00848159
- 17.Mitotic spindle rotation and mode of cell division in the developing telencephalonProc Natl Acad Sci U S A 100:2890–2895https://doi.org/10.1073/pnas.0437969100
- 18.Uber die determination des keimes bei echinodermenActa Zoologica 9:1–191https://doi.org/10.1111/j.1463-6395.1928.tb01165.x
- 19.Drosophila Pins-binding protein Mud regulates spindle-polarity coupling and centrosome organizationNat Cell Biol 8:586–593https://doi.org/10.1038/ncb1409
- 20.Identification of an Aurora-A/PinsLINKER/Dlg spindle orientation pathway using induced cell polarity in S2 cellsCell 138:1150–1163https://doi.org/10.1016/j.cell.2009.07.041
- 21.An evolutionary transition of Vasa regulation in echinodermsEvol Dev 11:560–573https://doi.org/10.1111/j.1525-142X.2009.00362.x
- 22.Neuroepithelial progenitors undergo LGN-dependent planar divisions to maintain self-renewability during mammalian neurogenesisNat Cell Biol 10:93–101https://doi.org/10.1038/ncb1673
- 23.Mechanisms of Spindle Positioning: Lessons from Worms and Mammalian CellsBiomolecules 9https://doi.org/10.3390/biom9020080
- 24.Nuclear beta-catenin is required to specify vegetal cell fates in the sea urchin embryoDevelopment 126:345–357
- 25.Regulation of cytokinesis by Rho GTPase fluxNat Cell Biol 11:71–77https://doi.org/10.1038/ncb1814
- 26.Expression patterns of four different regulatory genes that function during sea urchin developmentGene Expr Patterns 4:449–456https://doi.org/10.1016/j.modgep.2004.01.009
- 27.Galphai generates multiple Pins activation states to link cortical polarity and spindle orientation in Drosophila neuroblastsProc Natl Acad Sci U S A 104:14306–14311https://doi.org/10.1073/pnas.0701812104
- 28.Cortical neurons arise in symmetric and asymmetric division zones and migrate through specific phasesNat Neurosci 7:136–144https://doi.org/10.1038/nn1172
- 29.Spicule formation by isolated micromeres of the sea urchin embryoAmer Zool 15:567–581
- 30.An autoinhibited conformation of LGN reveals a distinct interaction mode between GoLoco motifs and TPR motifsStructure 21:1007–1017https://doi.org/10.1016/j.str.2013.04.005
- 31.Rapsynoid/partner of inscuteable controls asymmetric division of larval neuroblasts in DrosophilaJ Neurosci 20https://doi.org/10.1523/JNEUROSCI.20-14-j0003.2000
- 32.Methodology for Whole Mount and Fluorescent RNA In Situ Hybridization in Echinoderms: Single, Double, and BeyondMethods Mol Biol 2219:195–216https://doi.org/10.1007/978-1-0716-0974-3_12
- 33.Evolutionary modification of AGS protein contributes to formation of micromeres in sea urchinsNat Commun 10https://doi.org/10.1038/s41467-019-11560-8
- 34.A complete second gut induced by transplanted micromeres in the sea urchin embryoScience 259:1134–1138https://doi.org/10.1126/science.8438164
- 35.Polarity establishment, asymmetric division and segregation of fate determinants in early C. elegans embryosWormBook :1–43https://doi.org/10.1895/wormbook.1.30.2
- 36.Loss of the canonical spindle orientation function in the Pins/LGN homolog AGS3EMBO Rep 18:1509–1520https://doi.org/10.15252/embr.201643048
- 37.Heterotrimeric G proteins direct two modes of asymmetric cell division in the Drosophila nervous systemCell 107:183–194https://doi.org/10.1016/s0092-8674(01)00521-9
- 38.A protein complex containing Inscuteable and the Galpha-binding protein Pins orients asymmetric cell divisions in DrosophilaCurr Biol 10:353–362https://doi.org/10.1016/s0960-9822(00)00401-2
- 39.mex-1 and the general partitioning of cell fate in the early C. elegans embryoMech Dev 54:133–147https://doi.org/10.1016/0925-4773(95)00466-1
- 40.Bazooka recruits Inscuteable to orient asymmetric cell divisions in Drosophila neuroblastsNature 402:548–551https://doi.org/10.1038/990135
- 41.Microtubule-induced Pins/Galphai cortical polarity in Drosophila neuroblastsCell 123:1323–1335https://doi.org/10.1016/j.cell.2005.09.043
- 42.The NuMA-related Mud protein binds Pins and regulates spindle orientation in Drosophila neuroblastsNat Cell Biol 8:594–600https://doi.org/10.1038/ncb1412
- 43.Spindle orientation during asymmetric cell divisionNat Cell Biol 11:365–374https://doi.org/10.1038/ncb0409-365
- 44.Robust spindle alignment in Drosophila neuroblasts by ultrasensitive activation of pinsMol Cell 43:540–549https://doi.org/10.1016/j.molcel.2011.06.030
- 45.The embryonic cell lineage of the nematode Caenorhabditis elegansDev Biol 100:64–119https://doi.org/10.1016/0012-1606(83)90201-4
- 46.Intramolecular interaction in LGN, an adaptor protein that regulates mitotic spindle orientationJ Biol Chem 294:19655–19666https://doi.org/10.1074/jbc.RA119.011457
- 47.An optogenetic approach to control protein localization during embryogenesis of the sea urchinDev Biol 441:19–30https://doi.org/10.1016/j.ydbio.2018.06.015
- 48.Activator of G-protein signaling in asymmetric cell divisions of the sea urchin embryoDev Growth Differ 48:549–557https://doi.org/10.1111/j.1440-169X.2006.00895.x
- 49.Vasa protein expression is restricted to the small micromeres of the sea urchin, but is inducible in other lineages early in developmentDev Biol 314:276–286https://doi.org/10.1016/j.ydbio.2007.11.039
- 50.An ana2/ctp/mud complex regulates spindle orientation in Drosophila neuroblastsDev Cell 21:520–533https://doi.org/10.1016/j.devcel.2011.08.002
- 51.par-6, a gene involved in the establishment of asymmetry in early C. elegans embryos, mediates the asymmetric localization of PAR-3Development 122:3133–3140
- 52.Diversity of activator of G-protein signaling (AGS)-family proteins and their impact on asymmetric cell division across taxaDev Biol 465:89–99https://doi.org/10.1016/j.ydbio.2020.07.004
- 53.Return of the GDI: the GoLoco motif in cell divisionAnnu Rev Biochem 73:925–951https://doi.org/10.1146/annurev.biochem.73.011303.073756
- 54.Par3-mInsc and Galphai3 cooperate to promote oriented epidermal cell divisions through LGNNat Cell Biol 16:758–769https://doi.org/10.1038/ncb3001
- 55.Drosophila atypical protein kinase C associates with Bazooka and controls polarity of epithelia and neuroblastsJ Cell Biol 150:1361–1374https://doi.org/10.1083/jcb.150.6.1361
- 56.Small micromeres contribute to the germline in the sea urchinDevelopment 138:237–243https://doi.org/10.1242/dev.054940
- 57.Essential elements for translation: the germline factor Vasa functions broadly in somatic cellsDevelopment 142:1960–1970https://doi.org/10.1242/dev.118448
- 58.Drosophila neuroblast asymmetric cell division: recent advances and implications for stem cell biologyNeuron 51:13–20https://doi.org/10.1016/j.neuron.2006.06.016
- 59.Analysis of partner of inscuteable, a novel player of Drosophila asymmetric divisions, reveals two distinct steps in inscuteable apical localizationCell 100:399–409https://doi.org/10.1016/s0092-8674(00)80676-5
- 60.A mouse homologue of Drosophila pins can asymmetrically localize and substitute for pins function in Drosophila neuroblastsJ Cell Sci 116:887–896https://doi.org/10.1242/jcs.00297
- 61.Structural basis for interaction between the conserved cell polarity proteins Inscuteable and Leu-Gly-Asn repeat-enriched protein (LGN)Proc Natl Acad Sci U S A 108:19210–19215https://doi.org/10.1073/pnas.1110951108
- 62.LGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and Galphai/LGN/NuMA pathwaysMol Cell 43:418–431https://doi.org/10.1016/j.molcel.2011.07.011
- 63.LGN/mInsc and LGN/NuMA complex structures suggest distinct functions in asymmetric cell division for the Par3/mInsc/LGN and Gαi/LGN/NuMA pathwaysMol Cell 43:418–431https://doi.org/10.1016/j.molcel.2011.07.011
Article and author information
Author information
Version history
- Sent for peer review:
- Preprint posted:
- Reviewed Preprint version 1:
Copyright
© 2024, Emura et al.
This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.
Metrics
- views
- 70
- downloads
- 0
- citations
- 0
Views, downloads and citations are aggregated across all versions of this paper published by eLife.