DNA-PK is a DNA sensor for IRF-3-dependent innate immunity

  1. Brian J Ferguson
  2. Daniel S Mansur
  3. Nicholas E Peters
  4. Hongwei Ren
  5. Geoffrey L Smith  Is a corresponding author
  1. Imperial College London, United Kingdom
  2. University of Cambridge, United Kingdom
8 figures

Figures

DNA-PK binds DNA in the cytoplasm.

(A) Biotinylated DNA or biotinylated pam-3-cys were transfected into HEK 293T cells and 30 min later DNA was affinity purified from the cytoplasmic fraction before analysis of DNA/protein complexes …

https://doi.org/10.7554/eLife.00047.003
The innate immune response to DNA requires DNA-PK in fibroblasts.

(A) ISD DNA of different lengths was transfected into MEFs and the transcription of Cxcl10 was assayed by qPCR 6 hr later. (B) Double stranded oligonucleotides (bio-ISD), concatenated ISD DNA …

https://doi.org/10.7554/eLife.00047.004
IRF-3 and TBK1 are required for the stimulation of multiple genes in response to DNA.

(A) Primary wild type or Irf3−/− MEFs were transfected with DNA and the level of induction of Ifnb, Il6, Cxcl10 and Isg54 mRNAs were measured by qRT-PCR 6 hr later. (B) Immortalised wild type or Tbk1

https://doi.org/10.7554/eLife.00047.005
DNA-PK activates IRF-3-dependent, NF-κB–independent signalling.

(A) The localisation of endogenous IRF-3 was analysed by immunofluorescence 1 hr after transfection of primary wild type or Prkdc−/− MEFs with DNA or poly (I:C) (left panels) and quantified by …

https://doi.org/10.7554/eLife.00047.006
DNA-PKcs kinase activity is dispensable for the innate immune response to DNA.

Primary fibroblasts from Balb/c or PrkdcSCID mice were transfected with DNA or poly(I:C) or infected with MVA or NDV and the level of induction of (A) Ifnb, (B) Cxcl10, or (C) Il-6 was measured 6 hr …

https://doi.org/10.7554/eLife.00047.007
DNA-PK and TBK1 localise to sites of VACV DNA replication in infected cells.

HeLa cells were untreated or infected with MVA (m.o.i. = 5) for 6 hr. Cells were then fixed and stained with antibodies against (A) Ku80 or DNA-PKcs, and (B) TBK1 or IRF-3. Cytoplasmic viral …

https://doi.org/10.7554/eLife.00047.008
DNA-PK contributes to the IRF-3-dependent innate immune response to MVA.

(A) Ifnb and Cxcl10 transcription was measured 6 hr following MVA infection of primary WT and Irf3−/− fibroblasts at an m.o.i. of 5. (B) Wild type and Prkdc−/− MEFs were infected with MVA or NDV and …

https://doi.org/10.7554/eLife.00047.009
DNA-PKcs contributes to the innate immune response to MVA, HSV-1 and DNA in vivo.

(A) Groups of five Prkdc+/+ and Prkdc−/− mice were injected intradermally into the ear pinna with cationic lipids complexed with 1 μg DNA or poly(I:C). RNA was extracted from the tissue 12 hr later …

https://doi.org/10.7554/eLife.00047.010

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