Trithorax maintains the functional heterogeneity of neural stem cells through the transcription factor Buttonhead

  1. Hideyuki Komori
  2. Qi Xiao
  3. Derek H Janssens
  4. Yali Dou
  5. Cheng-Yu Lee  Is a corresponding author
  1. University of Michigan Medical School, United States
7 figures and 1 table

Figures

Figure 1 with 1 supplement
trx mutant type II neuroblasts display characteristics of a type I neuroblast.

Key for all figures: all clones are outlined in yellow. Wild-type type II neuroblasts or mutant type I neuroblasts (Dpn+AsePros; white arrow); Ase immature INPs (DpnAsePros; white arrowhead); Ase+ immature INPs (DpnAse+Pros; yellow arrow); INPs (Dpn+Ase+erm-lacZ+Proscytoplasmic; yellow arrowhead); GMC generated by INPs (Ase+erm-lacZ+Prosnuclear; orange arrow); wild-type type I neuroblasts or mutant type II neuroblasts (Dpn+Ase+Proscytoplasmic; magenta arrow); GMC generated by wild-type type I neuroblasts or mutant type II neuroblasts (Ase+Pros+erm-lacZ; magenta arrowhead). Single asterisks indicate a statistically significant (p-value <0.05) difference between the marked genotype and the control genotype in the same bar graph, as determined by the Student's t-test. n.s. indicates that the difference is statistically insignificant. NB: neuroblast. (AD) trx mutant type II neuroblasts progressively acquire a type I neuroblast identity. (AB) In the 72-hr GFP-marked clone, a wild-type type II neuroblast displays a Dpn+Ase marker expression profile whereas a trx mutant type II neuroblast displays a Dpn+Ase+ expression profile. Scale bar, 10 μm. (C) Three-dimensionally reconstructed images of type II neuroblasts clones of the indicated genotypes. Scale bar, 10 μm. (D) The frequency of trx mutant type II neuroblasts displaying a type I neuroblast maker expression profile (PntP1Ase+). N = 10 per time point. (EH) trx mutant type II neuroblasts lose the ability to generate INPs. (E) The average number of INPs per staged type II neuroblast clone of the indicated genotype. N = 10 per time point. (FG) In the 72-hr GFP-marked clones, a wild-type type II neuroblast is surrounded by INPs and their GMC progeny identified by erm-lacZ expression. In contrast, a trx mutant type II neuroblast is surrounded by GMCs that are directly derived from neuroblasts and lack erm-lacZ expression. Scale bar, 10 μm. (H) The average number of GMCs with or without erm-lacZ expression per type II neuroblast clone of the indicated genotypes.

https://doi.org/10.7554/eLife.03502.004
Figure 1—figure supplement 1
A diagram of two distinct neuroblast lineages.

A summary of the cell fate marker expression profile in type I and type II neuroblast lineage in the larval brain. NB: neuroblast; GMC: ganglion mother cell; INP: intermediate neural progenitor; imm INP: immature INP.

https://doi.org/10.7554/eLife.03502.005
trx mutant type II neuroblast directly generates GMCs.

(AE) trx is required for the expansion of supernumerary type II neuroblasts in the brat or erm mutant. (AD) Removing trx function suppresses the expansion of supernumerary type II neuroblasts and restores differentiation in the 96-hr brat or erm mutant type II neuroblast clones. Three-dimensionally reconstructed images of the clones are shown to the right. Scale bar, 10 μm. (E) The average number of type II neuroblasts per clone of the indicated genotypes. (FI) trx mutant type II neuroblasts exclusively distribute Pros to their progenies to specify GMC identity. (FG) In the 48-hr clones, a wild-type type II neuroblast shows undetectable expression of Pros in telophase, whereas a trx mutant type II neuroblast shows the basal cortical localization of Pros. Scale bar, 10 μm. (H) The frequency of wild-type or trx mutant mitotic type II neuroblasts displaying the basal localization of Pros. (I) The average number of type I neuroblasts per type II neuroblast clone of the indicated genotypes at 72 hr after clone induction.

https://doi.org/10.7554/eLife.03502.006
Figure 3 with 2 supplements
Trx and the core components of the SET/MLL complex maintain a type II neurobalst functional identity dependently on their catalytic activity for H3K4 methylaiton.

(AB) The function of trx for the H3K4 methylation is required for the maintenance of a type II neuroblast functional identity. (AB) In the 72-hr clones, a trxZ11 mutant type II neuroblast displays a type I neuroblast marker expression profile and directly generates GMCs. Scale bar, 10 μm. Three-dimensionally reconstructed images of the clones are shown to the right. Scale bar, 10 μm. (CK) The function of rbbp5 for the H3K4 methylation is required for the maintenance of a type II neuroblast functional identity. (CE, H, J) In the 96-hr clones, rbbp5null type II neuroblasts display a type I neuroblast marker expression profile and directly generate GMCs. Over-expression of rbbp5FL but not rbbp5SG restores a type II neuroblast functional identity in rbbp5null type II neuroblasts. Three-dimensionally reconstructed images of the clones are shown to the right. Scale bar, 10 μm. (F) The frequency of type II neuroblasts of the indicated genotypes displaying the type I or type II marker expression profiles. (G, I, K) rbbp5 function is essential for the H3K4 methylation in fly larval brains. Scale bar, 10 μm.

https://doi.org/10.7554/eLife.03502.007
Figure 3—figure supplement 1
Decreasing the function of the core components of the SET1/MLL complex leads to a reduction in type II neuroblasts.

(AE) Knocking down the function of trx, rbbp5, wds or ash2 specifically reduces the number of type II neuroblasts per brain lobe. Scale bar, 20 μm. (FG) The average number of type II neuroblasts or INPs per brain lobe of the indicated genotypes after knocking down the function of trx, rbbp5, wds, or ash2 for 72 hr.

https://doi.org/10.7554/eLife.03502.008
Figure 3—figure supplement 2
Generation of the rbbp5null allele and the UAS-rbbp5SG transgene.

(A) The genomic organization of the rbbp5 locus. The rbbp5null allele was generated via imprecise excision of the P(EP)G4226 element, which removes the entire rbbp5 coding region. Yellow squares indicate the coding exons of rbbp5 while blue squares indicate the untranslated regions. The red line indicates the molecular lesion induced by the rbbp5null allele. (B) The average number of INPs per clone of the indicated genotypes at 96 hr after clone induction. (C) An alignment of the hinge region of the yeast, fly, and human Rbbp5 protein. The amino acid substitutions in the Rbbp5SG transgenic protein are indicated in red.

https://doi.org/10.7554/eLife.03502.009
Figure 4 with 2 supplements
Btd likely acts downstream of Trx to maintain a type II neuroblast functional identity.

(AD) The btd gene is an excellent candidate target of Trx in the type II neuroblast. (A) The btd mRNA is highly enriched in the lysate extracted from larval brain enriched with type II neuroblasts. The elav transcript is highly enriched in differentiated neurons. The quantification represents the average of three biological replicates. (B) Trx directly binds to the type II neuroblast-specific enhancer element as well as the transcription start site (TSS) of the btd gene. The ChIP experiments were performed using the extract isolated from dissected brat mutant brains that are enriched with type II neuroblasts. Quantification of chromatin immunoprecipitated by the indicated antibodies relative to 5% of input. The quantification represents the average of three biological replicates. (CD) An enhancer element from the btd gene is sufficient to induce type II neuroblast-specific expression of a UAS-mCD8::gfp reporter transgene in wild-type brain, while the enhancer activity of btd-Gal4 was reduced in rbbp5null brain. Scale bar, 20 μm. (EH) btd is required for maintaining the functional identity but not the molecular signature of a type II neuroblast. (EF) In the 72-hr clones, btd mutant type II neuroblasts maintain a type II neuroblast marker expression profile and are surrounded by 1–2 immature INP-like cells. Three-dimensionally reconstructed images of the clones are shown below. Scale bar, 10 μm. (G) The average number of INPs per clone of the indicated genotypes. (H) The average number of GMCs with or without erm-lacZ expression per type II neuroblast clones of the indicated genotypes at 72 hr after clone induction. (IJ) The immature INP-like cells generated by btd mutant type II neuroblasts are insensitive to loss of brat function. Removing brat function does not lead to supernumerary neuroblast formation in the 72-hr btd mutant type II neuroblast clones. Scale bar, 10 μm.

https://doi.org/10.7554/eLife.03502.010
Figure 4—figure supplement 1
Global H3K4 mono- or tri-methylation is not required for maintenance of a type II neuroblast functional identity.

(AH) The core component of the SET1/MLL complex is required for the global methylation of H3K4. (A, C, E, G) Knocking down the function of ash2 or trr leads to global loss of the H3K4 mono-methylation while knocking down the function of dSet1 does not. Scale bar, 10 μm. (B, D, F, H) Knocking down the function of ash2 or dSet1 leads to global loss of the H3K4 mono-methylation while knocking down the function of trr does not. (IJ) trr and dSet1 are dispensable for the maintenance of type II neuroblasts. (IJ) The average number of type II neuroblasts or INPs per brain lobe of the indicated genotypes after knocking down the function of trr or dSet1 for 72 hr. (KN) trx mutant type II neuroblasts do not display appreciable reduction in the global methylation pattern. Scale bar, 10 μm.

https://doi.org/10.7554/eLife.03502.011
Figure 4—figure supplement 2
Pnt likely functions to specify an INP identity.

(A) Trx directly binds to transcription start site (TSS) of the pntP1 transcript. Quantification of chromatin immunoprecipitated by the indicated antibodies relative to 5% of input. The quantification represents the average of three biological replicates. The black lines indicate three different pnt transcripts. The magenta lines indicate three UAS-RNAi used to target the common exon of pnt transcripts. (1) UAS-pntRNAi (7171), (2) UAS-pntRNAi (TRiP.JF02227), and (3) UAS-pntRNAi (TRiP.HMSO1452). (BC) Expression of the UAS-pntRNAi transgene efficiently reduces PntP1 protein expression throughout the type II neuroblast lineage. (DE) Knocking down the function of pnt induces supernumerary neuroblast formation. Scale bar, 10 μm. (FG) The average number of type II neuroblasts per clone of the indicated genotypes.

https://doi.org/10.7554/eLife.03502.012
Over-expression of btd is sufficient to instruct a type II neuroblast functional identity in the type I neuroblast.

(AE) Over-expression of btd is sufficient to elicit a type II neuroblast functional identity. (AD) In the 72-hr clones, 18% of type I neuroblasts over-expressing btd lose Ase expression and are surrounded by INP-like cells. An additional 10% of these neuroblasts maintain Ase expression despite being surrounded by INP-like cells. Three-dimensionally reconstructed images of the clones are shown to the right. Scale bar, 10 μm. (EH) Progeny of type I neuroblasts over-expressing btd revert back to supernumerary neuroblast in the brat mutant or erm mutant. In the 72-hr clones, removing brat or erm function induces the formation of supernumerary type II neuroblasts derived from the progeny of type I neuroblasts over-expressing btd. Three-dimensionally reconstructed images of clones are shown to the right. Scale bar, 10 μm.

https://doi.org/10.7554/eLife.03502.013
Over-expression of btd restores a type II neuroblast functional identity in trx mutant type II neuroblasts.

(AD) Overexpression of btd reinstates the ability to generate INPs in trx mutant type II neuroblasts. (AB) In the 72-hr clones, while the control trx mutant type II neuroblasts are surrounded by GMCs, trx mutant type II neuroblasts over-expressing btd are surrounded by INP progeny. Three-dimensionally reconstructed images of the clones are shown to the right. Scale bar, 10 μm. (C) The neuroblast marker expression profile displayed by type II neuroblasts of the indicated genotypes. (D) The average number of INPs per clone of the indicated genotypes.

https://doi.org/10.7554/eLife.03502.014
A summary model.

The Trx histone methyltransferase complex maintains the type II neuroblast functional identity through the btd gene whereas it promotes INP identity specification through the pnt gene.

https://doi.org/10.7554/eLife.03502.015

Tables

Table 1

Summary of the marker expression profile in various genetic backgrounds

https://doi.org/10.7554/eLife.03502.003
GenotypeNeuroblast typeDpnAsePros*PntP1
wild-typeI+++
wild-typeII++
Trx−/−I+++
Trx−/−II+++
Rbbp5−/−I+++
Rbbp5−/−II+++
btd−/−I+++
btd−/−II++
  1. ‘+’ indicates detected marker expression whereas ‘−’ indicates lack of marker expression. ‘*’ indicates basal asymmetric localization at the basal cortex in mitotic neuroblasts.

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  1. Hideyuki Komori
  2. Qi Xiao
  3. Derek H Janssens
  4. Yali Dou
  5. Cheng-Yu Lee
(2014)
Trithorax maintains the functional heterogeneity of neural stem cells through the transcription factor Buttonhead
eLife 3:e03502.
https://doi.org/10.7554/eLife.03502