The biological function of an insect antifreeze protein simulated by molecular dynamics

  1. Michael J Kuiper  Is a corresponding author
  2. Craig J Morton
  3. Sneha E Abraham
  4. Angus Gray-Weale
  1. The University of Melbourne, Australia
  2. St Vincent's Institute of Medical Research, Australia

Abstract

Antifreeze proteins (AFP) protect certain cold-adapted organisms from freezing to death by selectively adsorbing to internal ice crystals and inhibiting ice propagation. The molecular details of AFP adsorption-inhibition is uncertain but is proposed to involve the Gibbs-Thomspon effect. Here we show by using unbiased molecular dynamics simulations a protein structure-function mechanism for the spruce budworm Choristoneura fumiferana AFP, including stereo-specific binding and consequential melting and freezing inhibition. The protein binds indirectly to the prism ice face through a linear array of ordered water molecules that are structurally distinct from the ice. Mutation of the ice binding surface disrupts water-ordering and abolishes activity. The adsorption is virtually irreversible, and we confirm the ice growth inhibition is consistent with the Gibbs-Thompson law.

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Author details

  1. Michael J Kuiper

    Victorian Life Sciences Computation Initiative, The University of Melbourne, Carlton, Australia
    For correspondence
    mkuiper@unimelb.edu.au
    Competing interests
    The authors declare that no competing interests exist.
  2. Craig J Morton

    ACRF Rational Drug Discovery Centre, St Vincent's Institute of Medical Research, Fitzroy, Australia
    Competing interests
    The authors declare that no competing interests exist.
  3. Sneha E Abraham

    School of Chemistry, The University of Melbourne, Melbourne, Australia
    Competing interests
    The authors declare that no competing interests exist.
  4. Angus Gray-Weale

    School of Chemistry, The University of Melbourne, Melbourne, Australia
    Competing interests
    The authors declare that no competing interests exist.

Copyright

© 2015, Kuiper et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

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  1. Michael J Kuiper
  2. Craig J Morton
  3. Sneha E Abraham
  4. Angus Gray-Weale
(2015)
The biological function of an insect antifreeze protein simulated by molecular dynamics
eLife 4:e05142.
https://doi.org/10.7554/eLife.05142

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https://doi.org/10.7554/eLife.05142

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