Computational and Systems Biology

Latest articles

1. 1. Computational and Systems Biology
   2. Immunology and Inflammation

   ImmCellTyper facilitates systematic mass cytometry data analysis for deep immune profiling

   Jing Sun, Desmond Choy ... Shahram Kordasti

   ImmCellTyper enhances CyTOF data analysis by combining expert biological knowledge with advanced clustering tools to provide an accurate, comprehensive, and user-friendly solution for high-dimensional immune profiling.
2. 1. Computational and Systems Biology
   2. Ecology

   A rapid phylogeny-based method for accurate community profiling of large-scale metabarcoding datasets

   Lenore Pipes, Rasmus Nielsen

   Tronko provides a scalable solution for accurate taxonomic assignment for large-scale metabarcoding datasets by overcoming the speed and memory limitations of previous phylogenetic placement methods.
3. 1. Neuroscience
   2. Computational and Systems Biology

   Multisensory integration operates on correlated input from unimodal transients channels

   Cesare V Parise, Marc O Ernst
4. 1. Microbiology and Infectious Disease
   2. Computational and Systems Biology

   Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data

   Michael B Hall, Ryan R Wick ... Lachlan JM Coin
5. 1. Neuroscience
   2. Computational and Systems Biology

   Estradiol elicits distinct firing patterns in arcuate nucleus kisspeptin neurons of females through altering ion channel conductances

   Jian Qiu, Margaritis Voliotis ... Martin J Kelly
6. 1. Computational and Systems Biology
   2. Neuroscience

   White matter structural bases for phase accuracy during tapping synchronization

   Pamela Garcia-Saldivar, Cynthia de León ... Hugo Merchant
7. 1. Microbiology and Infectious Disease
   2. Computational and Systems Biology

   An antimicrobial drug recommender system using MALDI-TOF MS and dual-branch neural networks

   Gaetan De Waele, Gerben Menschaert, Willem Waegeman
8. 1. Computational and Systems Biology
   2. Developmental Biology

   Differential regulation of the proteome and phosphosproteome along the dorso-ventral axis of the early Drosophila embryo

   Juan Manuel Gomez, Hendrik Nolte ... Maria Leptin
9. 1. Computational and Systems Biology
   2. Structural Biology and Molecular Biophysics

   MDverse, shedding light on the dark matter of molecular dynamics simulations

   Johanna KS Tiemann, Magdalena Szczuka ... Pierre Poulain

   Identifying, indexing, and annotating molecular dynamics simulations open data is essential to ensure their proper reuse.
10. 1. Computational and Systems Biology
    2. Physics of Living Systems

    Light-driven synchronization of optogenetic clocks

    Maria Cristina Cannarsa, Filippo Liguori ... Roberto Di Leonardo