Developmental compartments in the larval trachea of Drosophila

  1. Prashanth R Rao
  2. Li Lin
  3. Hai Huang
  4. Arjun Guha
  5. Sougata Roy
  6. Thomas B Kornberg  Is a corresponding author
  1. University of California, San Francisco, United States
6 figures and 1 table

Figures

Cell divisions in the second tracheal metamere during the third instar.

(A) Drawings of the Tr2 branches before (early L3) and after (late L3) the onset of cell divisions; dorsal trunk (DT), dorsal branch (DB), visceral branch (VB), spiracular branch (SB), transverse …

https://doi.org/10.7554/eLife.08666.003
Patterns of gene expression in the second tracheal metamere of third instar larvae.

(A-–C) A Tr2 preparation stained for Sal, Ser and Delta; (A) Sal expression was specific to the DT; (A’) anti-Sal antibody stained the DT, but not DB, TC or VB; (B) Ser was expressed in the DT, ASP …

https://doi.org/10.7554/eLife.08666.004
Discrete regions of Notch activation in the second tracheal metamere.

(A) Drawing of a late L3 Tr2 metamere with red areas indicating the regions that express the Notch reporter NRE-lacZ; (B) Tr2 of a stage 14–16 embryo with tracheal nuclei marked with GFP …

https://doi.org/10.7554/eLife.08666.005
Figure 4 with 7 supplements
Marked clones that meet but do not cross into or from the dorsal trunk.

(A-–D) Marked clones in the DT line the DT/DB junction. (A) large patch of GFP-expressing cells abuts the DT/DB junction; Cut expression in TC (red); clone induction by regimen Experiment E (Table 1)…

https://doi.org/10.7554/eLife.08666.007
Figure 4—figure supplement 1
Dorsal trunk clones at the DT/DB border.

GFP-expressing clones induced by regimens A-H; arrows point to DT/DB junction. (A, B) NRE-LacZ (red); (C, H4,5) DAPI (blue); (D) anti-Delta (red); (E) anti-Cut (red); (F) anti-Ser (red); the …

https://doi.org/10.7554/eLife.08666.008
Figure 4—figure supplement 2
Dorsal branch clones at the DT/DB border.

GFP-expressing clones induced by regimens B-H; arrows point to DT/DB junction. (B) NRE-LacZ (red); (C) DAPI (blue); (D) anti-Delta (red); (E) anti-Cut (red); (G, H) Dual clone regimens produced …

https://doi.org/10.7554/eLife.08666.009
Figure 4—figure supplement 3
Dorsal trunk and dorsal branch clones abutting the same DT/DB border.

GFP- and LacZ-expressing clones induced by regimen G; arrows point to DT/DB junction. Regimen G produced clones that expressed GFP (green), LacZ (red) or both (yellow).

https://doi.org/10.7554/eLife.08666.010
Figure 4—figure supplement 4
Dorsal trunk clones at the DT/TC border.

GFP-expressing clones induced by regimens A-H; arrows point to DT/TC junction. (A, B) NRE-LacZ (red); (C) DAPI (blue); (D) anti-Delta (red); (E) anti-Cut (red); (F) anti-Ser (red); (F1, F1”) images …

https://doi.org/10.7554/eLife.08666.011
Figure 4—figure supplement 5
Transverse connective clones abutting the DT/TC border.

GFP-expressing clones induced by regimens C, D, E, F, H; arrows point to DT/TC junction. DAPI (blue); (D) anti-Delta (red); (E) anti-Cut (red); (F) anti-Ser (red); (H) Dual clone regimen produced …

https://doi.org/10.7554/eLife.08666.012
Figure 4—figure supplement 6
Large marked cells in the TC domain of the DT.

Panel labels refer to marking regimens for clones; arrows indicate the one or two large marked cells in the TC domain and (*) indicates node cells. (A) NRE-LacZ (red); (D) anti-Delta (red); (E) …

https://doi.org/10.7554/eLife.08666.013
Figure 4—figure supplement 7
Marked patches of cells that straddle the DT/DB and DT/TC borders.

Panel labels refer to marking regimens for DT/DB clones (upper panels) and DT/TC clones (lower panels); borders indicated by arrows. (A, B) NRE-LacZ (red); (D) anti-Delta (red); (E) anti-Cut (red); …

https://doi.org/10.7554/eLife.08666.014
Mutant clones transform dorsal branch, dorsal trunk and transverse connective cells.

(A) Control DT clone of GFP-expressing cells with no effect on morphology or expression of Delta; (B-–F’) Clones of sal mutant DT cells generated bulges, apparently sorting out, and lacked Delta …

https://doi.org/10.7554/eLife.08666.015
Notch signaling is required by dorsal branch cells at the junction with the dorsal trunk.

(A) Clone of DB cells that ectopically expressed Delta (green) increased the diameter of the DB and induced wild type neighbors to express vein-lacZ (red), normally expressed in the DB only by cells …

https://doi.org/10.7554/eLife.08666.016

Tables

Table 1
https://doi.org/10.7554/eLife.08666.006

Regimen

Marking system

# Specimens

# Marked DT

HS stage

HS

DT/DB border clones

DT/TC border clones

DT side

DB side

DT DB

DT side

TC side

A

GFP, NRE lacz

106

40

48-50h AEL

8' 35°

3

0

 

5

0

B

GFP, NRE-lacz

59

24

24-32h AEL

5' 37°

7

1

8

0

C

GFP

29

11

24-32h AEL

5' 37°

2

1

1

1

D

MARCM,  α-Delta

52

43

4-6h AEL

60' 38°

1

3

4

5

E

MARCM,  α-Cut

48

34

4-6h AEL

60' 38°

6

2

6

5

F

M MARCM, α-Ser

251

30

4-6h AEL

30' 38°

3

2

2

3

G

GFP & LacZ,  α-Ser

119

114 (GFP) 79 (LacZ)*

24-26h AEL

15' 37°

11

11

6**

8

0

H

GFP & LacZ

116

61 (GFP) 34 (LacZ)*

24-26h AEL

6' 37°

9

5

0

6

1

TOTAL

780

361

42

25

6

40

15

  1. Genotype A: NRElacz/hsFLP; actin>y >GAL4,UAS-GFP/ ; /MKRS B: NRElacz/hsFLP; actin>y >GAL4,UAS-GFP/ ; /MKRS C: hsFLP/Y; actin>y >GAL4,UAS-GFP/ ; /MKRS D: hsFLP122,tubGAL4,UAS-NLS-GFP/ ; tubGal80 FRT40a/FRT40a; / E: hsFLP122,tubGAL4,UAS-NLS-GFP/ ;tubGal80,FRT40a /FRT40a; / F: hsFLP,tubGAL4, UAS-GFP-NLS; / ;RpS17,tubGal80,FRT80a/FRT80a G: hsFLP/ orY; actin>y >GAL4,UAS-GFP/ ;actin>stop>lacZ-NLS/MKRS H: hsFLP/ orY; actin>y >GAL4,UAS-GFP/ ;actin>stop>lacZ-NLS/MKRS * # DTs with clones at or near the DB and TC borders ** specimens with independently marked DT and DB clones

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