Functional connections of undetermined connectivity are indicated as broken lines. As pFL neurons are excitatory (Onimaru et al., 2008; Thoby-Brisson et al., 2009) and lack inhibitory markers (Ellenberger, 1999; Tanaka et al., 2003), inhibitory connections from pFL to preBötC are indirect (see Figure 7 in Huckstepp et al., 2015). (A) Embryonic stage (all data in vitro). (Ai) pFL (red circle) oscillates at embryonic day 14.5 (E14.5). (Aii) preBötC (blue circle) oscillates at embryonic day 15.5 (E15.5) and couples to the pFL, where it excites and inhibits different groups of pFL neurons. (Aiii) preBötC and pFL can oscillate independently of each other following a transverse section caudal to facial nucleus. (Aiv) pFL can oscillate in the absence of preBötC following bath application of a glutamatergic antagonist (CNQX). (Av) preBötC can oscillate in the absence of the pFL following bath application of a sodium channel blocker (riluzole) (Thoby-Brisson et al., 2009). (B) Postnatal stage. (Bi) In late fetal (Thoby-Brisson et al., 2005; Bouvier et al., 2008) and postnatal rats (Smith et al., 1991), the preBötC can oscillate in the absence of the pFL in transverse slices, and (Bii) the pFL can oscillate independently following suppression of preBötC rhythm by bath application of opioid agonists (Takeda et al., 2001; Janczewski et al., 2002). Biii) Immediately following birth, respiratory rhythm is driven by pFL (Onimaru and Homma, 2003; Oku et al., 2007). (Biv) Shortly after birth (>1 day), the breathing CPG becomes driven by the preBötC (Oku et al., 2007). (C) Juvenile stage. (Ci) Expiration and inspiration alternate and are reciprocally coupled. (Cii) PreBötC and pFL are differentially affected by fentanyl, which shifts breathing to an expiratory-dominant pattern. (Cii + iii) preBötC and pFL can be independently suppressed by activation of Breuer-Hering deflation reflex (BHDR; Cii) or inflation reflex (BHIR; Ciii) (Janczewski and Feldman, 2006). (D) Adult Stage: (Di) breathing is inspiratory driven by preBötC while pFL activity is normally suppressed at rest (also see Pagliardini et al., 2011 and Huckstepp et al., 2015); (Dii) activation of HM4DR transfected pFL neurons by CNO (see Figure 6) or optogenetic activation (Pagliardini et al., 2011), or suppression of AlstR transfected preBötC neurons with Alst (see Figure 2, 7) can induce active expiration; (Dii) as preBötC neurons project to the pFV but do not appear to project to the pFL (Tan et al., 2010), excitatory drive from the preBötC to the pFL is most likely through an intermediate excitatory relay, such as the pFV. (Diii) Depression of inspiration by Alst, in presence or absence of CNO, leads to tonic expiratory activity during hypercapnia (see Figures 2, 7) or (Div) apnea during hypoxia (see Figures 2, 7). (Dv) As breathing returns, abdominal activity remains absent until inspiratory activity is near normal levels (see Figure 8), implicating an indirect involvement of preBötC excitatory neurons in expiration either through its excitatory projections throughout breathing CPG (Tan et al., 2010), including pFV that contributes to expiratory activity (Huckstepp et al., 2015), or through mechanosensory feedback that can provides expiratory drive (Remmers, 1973; Davies and Roumy, 1986; Janczewski and Feldman, 2006).