RNG105/caprin1, an RNA granule protein for dendritic mRNA localization, is essential for long-term memory formation

  1. Kei Nakayama
  2. Rie Ohashi
  3. Yo Shinoda
  4. Maya Yamazaki
  5. Manabu Abe
  6. Akihiro Fujikawa
  7. Shuji Shigenobu
  8. Akira Futatsugi
  9. Masaharu Noda
  10. Katsuhiko Mikoshiba
  11. Teiichi Furuichi
  12. Kenji Sakimura
  13. Nobuyuki Shiina  Is a corresponding author
  1. National Institute for Basic Biology, Japan
  2. SOKENDAI, Japan
  3. Okazaki Institute for Integrative Bioscience, Japan
  4. Tokyo University of Science, Japan
  5. Tokyo University of Pharmacy and Life Sciences, Japan
  6. Niigata University, Japan
  7. Kobe City College of Nursing, Japan
  8. Brain Science Institute, Japan
10 figures, 1 video and 8 additional files

Figures

Figure 1 with 1 supplement
Generation of RNG105 conditional deletion mice.

(A) Gene structure of the Rng105 genome, targeting vector, floxed Rng105, and after excision of the floxed sequence. Arrowheads indicate PCR primers for genotyping. (B) PCR analysis of the indicated …

https://doi.org/10.7554/eLife.29677.003
Figure 1—figure supplement 1
Reduced expression of RNG105 without the expression of truncated forms in the cerebrum of Camk2a-Cre;Rng105f/f mice.

(A) Reduction of Rng105 transcripts in Camk2a-Cre;Rng105f/f mice compared to Rng105f/f mice. RNA-seq read coverage across the Rng105 genome for triplicate RNA samples from the hippocampus of Rng105f/…

https://doi.org/10.7554/eLife.29677.004
RNG105-deficient mice have small dendritic spines.

(A) Density of CA1 hippocampal neurons measured by nuclear staining in the SP. n = 11. Student's t-test, p=0.674. (B) CA1 pyramidal neurons imaged with Thy1-GFP. Scale bar, 50 µm. (C and D) Length …

https://doi.org/10.7554/eLife.29677.005
RNG105 deficiency impairs structural plasticity of dendritic spines.

(A) Fluorescence images of cultured hippocampal neurons from Rng105f/f mice transfected with mCherry (left) or both mCherry and CMV-Cre (right), and immunostained for RNG105. Arrows indicate …

https://doi.org/10.7554/eLife.29677.006
RNG105 deficiency reduces fEPSP amplitude in hippocampal CA1.

(A) Representative fEPSP traces evoked by different stimulation intensities. (B) Input-output (I/O) relationship between CA3 stimulation magnitude and CA1 fEPSP responses. n = 10 (Rng105f/f) and 13 …

https://doi.org/10.7554/eLife.29677.007
Figure 5 with 1 supplement
Impaired habituation to a novel place and normal motor skill learning in Camk2a-Cre;Rng105f/f mice.

(A) Open field test. The number of line crossings during a 5 min trial on 3 consecutive days. n = 14 (Rng105f/f), 9 (Camk2a-Cre;Rng105f/f) and 10 (Camk2a-Cre;Rng105f/+). ****p<0.001 (genotype …

https://doi.org/10.7554/eLife.29677.008
Figure 5—figure supplement 1
Normal anxiety-like behavior and reduced novel object preference in Camk2a-Cre;Rng105f/f mice.

(A) Light/dark transition test. Left, distance traveled in the light (L) and dark (D) chambers; middle, time spent in the light chamber; right, the number of transition during a 5 min trial. n = 13 …

https://doi.org/10.7554/eLife.29677.009
Figure 6 with 1 supplement
RNG105 conditional deletion mice display impaired long-term memory.

(A−D) Morris water maze. Escape latency to the platform in visible (A) and hidden (B) platform tasks. Density plot of swim paths averaged from all mice (C) and the time spent in each quadrant (D) …

https://doi.org/10.7554/eLife.29677.010
Figure 6—figure supplement 1
Camk2a-Cre;Rng105f/f mice exhibit less freezing behavior in a contextual fear conditioning test.

Freezing time in a test chamber, in which the mouse had received foot shock 5 days before. n = 8 (Rng105f/f) and 4 (Camk2a-Cre;Rng105f/f). ****p<0.001 (genotype effect) using two-way repeated …

https://doi.org/10.7554/eLife.29677.011
Identification of somatically and dendritically enriched mRNAs (S- and D-mRNAs) in the hippocampal CA1.

(A) Schematic diagram of a mouse hippocampal slice. (B) A hippocampal slice from an adult mouse (P12 weeks) before (left) and after (right) isolation of CA1 SR. Nuclei are stained with Yo-Pro1 …

https://doi.org/10.7554/eLife.29677.013
Reduced dendritic localization of D-mRNAs in RNG105-deficient mice.

(A) MA plots of mRNAs in the hippocampal CA1 of Rng105f/f mice (left) and Camk2a-Cre;Rng105f/f mice (right). (B) Heat maps showing DAI of each mRNA in Rng105f/f mice (left lane), in Camk2a-Cre;Rng105

https://doi.org/10.7554/eLife.29677.014
Dendritic accumulation of mRNAs classified in ‘regulation of Arf protein signal transduction’ and ‘structural constituent of ribosome’ is reduced by RNG105 deficiency.

(A and B) MA plots of mRNAs classified in ‘regulation of Arf protein signal transduction’ (A) and ‘structural constituent of ribosome’ (B) in Rng105f/f mice (left) and Camk2a-Cre;Rng105f/f mice …

https://doi.org/10.7554/eLife.29677.015
Figure 10 with 1 supplement
RNG105 deficiency impairs AMPAR scaling in response to activity deprivation.

(A and B) Immunostaining for GluR1 (A) and GluR2 (B) in cultured neurons (9 DIV) from the cerebral cortex of E17.5 Rng105+/+ and Rng105−/− littermates. The neurons were cultured with (+) or without …

https://doi.org/10.7554/eLife.29677.016
Figure 10—figure supplement 1
RNG105 deficiency impairs AMPAR scaling in response to activity deprivation (biotinylation assay).

(A) Total cell lysates of surface-biotinylated primary cultured neurons (9 DIV) from E17.5 wild-type mouse cerebral cortex (total), and avidin agarose beads-bound fractions of the lysates (surface), …

https://doi.org/10.7554/eLife.29677.017

Videos

Video 1
RNG105 conditional deletion mice exhibit seizures.

This movie shows a seizure in a Camk2a-Cre;Rng105f/f mouse just after the contextual fear conditioning test (passive avoidance).

https://doi.org/10.7554/eLife.29677.012

Additional files

Supplementary file 1

Differential mRNA enrichment analysis between SP and SR of hippocampus − All mRNAs (36,701)

https://doi.org/10.7554/eLife.29677.018
Supplementary file 2

(A) mRNAs eliminated from the candidates for dendritic mRNAs. (B) mRNAs eliminated from the candidates for somatic mRNAs

https://doi.org/10.7554/eLife.29677.019
Supplementary file 3

(A) Dendritically enriched mRNAs (1,122). (B) Somatically enriched mRNAs (2,106). (C) mRNAs not significantly enriched in dendrites nor soma (2,814)

https://doi.org/10.7554/eLife.29677.020
Supplementary file 4

(A) Dendritic mRNAs classified in ‘regulation of Arf protein signal transduction’. (B) Dendritic mRNAs classified in ‘structural constituent of ribosome’. (C) Dendritic mRNAs classified in ‘translation’. (D) Dendritic mRNAs classified in ‘Fc gamma R-mediated phagocytosis’. (E) Dendritic mRNAs classified in ‘pleckstrin homology’. (F) Dendritic mRNAs classified in ‘chemotaxis’. (G) Dendritic mRNAs classified in ‘GTPase regulator activity’. (H) Dendritic mRNAs classified in ‘leukocyte activation’. (I) Dendritic mRNAs classified in ‘SH3’

https://doi.org/10.7554/eLife.29677.021
Supplementary file 5

(A) mRNAs for AMPA receptor subunits and dendritic mRNAs for AMPA receptor regulators. (B) SR-enriched mRNAs involved in membrane potential regulation

https://doi.org/10.7554/eLife.29677.022
Supplementary file 6

mRNAs reduced in Camk2a-Cre;Rng105f/f soma

https://doi.org/10.7554/eLife.29677.023
Supplementary file 7

Statistical reporting table

https://doi.org/10.7554/eLife.29677.024
Transparent reporting form
https://doi.org/10.7554/eLife.29677.025

Download links