Anti-diabetic drug binding site in a mammalian KATP channel revealed by Cryo-EM
- Oregon Health and Science University, United States
- University of Washington, United States
Abstract
Sulfonylureas are anti-diabetic medications that act by inhibiting pancreatic KATP channels composed of SUR1 and Kir6.2. The mechanism by which these drugs interact with and inhibit the channel has been extensively investigated, yet it remains unclear where the drug binding pocket resides. Here, we present a cryo-EM structure of a hamster SUR1/rat Kir6.2 channel bound to a high-affinity sulfonylurea drug glibenclamide and ATP at 3.63Å resolution, which reveals unprecedented details of the ATP and glibenclamide binding sites. Importantly, the structure shows for the first time that glibenclamide is lodged in the transmembrane bundle of the SUR1-ABC core connected to the first nucleotide binding domain near the inner leaflet of the lipid bilayer. Mutation of residues predicted to interact with glibenclamide in our model led to reduced sensitivity to glibenclamide. Our structure provides novel mechanistic insights of how sulfonylureas and ATP interact with the KATP channel complex to inhibit channel activity.
Data availability
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Cryo-EM structure of the pancreatic beta-cell KATP channel bound to ATP and glibenclamidePublicly available at RCSB Protein Data Bank (http://www.rcsb.org).
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Cryo-EM structure of the pancreatic beta-cell KATP channel bound to ATP and glibenclamidePublicly available at RCSB Protein Data Bank (http://www.rcsb.org).
Article and author information
Author details
Funding
National Institute of Diabetes and Digestive and Kidney Diseases (R01DK066485)
- Show-Ling Shyng
National Institute of Diabetes and Digestive and Kidney Diseases (F31DK105800)
- Gregory M Martin
The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.
Copyright
© 2017, Martin et al.
This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.
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Anti-diabetic drug binding site in a mammalian KATP channel revealed by Cryo-EM
eLife 6:e31054.
https://doi.org/10.7554/eLife.31054
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