Crystal structure of intraflagellar transport protein 80 reveals a homo-dimer required for ciliogenesis

  1. Michael Taschner
  2. Anna Lorentzen
  3. André Mourão
  4. Toby Collins
  5. Grace M Freke
  6. Dale Moulding
  7. Jerome Basquin
  8. Dagan Jenkins  Is a corresponding author
  9. Esben Lorentzen  Is a corresponding author
  1. Aarhus University, Denmark
  2. Helmholtz Zentrum München, Germany
  3. University College London, United Kingdom
  4. Max Planck Institute of Biochemistry, Germany

Abstract

Oligomeric assemblies of intraflagellar transport (IFT) particles build cilia through sequential recruitment and transport of ciliary cargo proteins within cilia. Here we present the 1.8Å resolution crystal structure of the Chlamydomonas IFT-B protein IFT80, which reveals the architecture of two N-terminal b-propellers followed by an a-helical extension. The N-terminal b-propeller tethers IFT80 to the IFT-B complex via IFT38 whereas the second b-propeller and the C-terminal a-helical extension result in IFT80 homo-dimerization. Using CRISPR/Cas to create biallelic Ift80 frameshift mutations in IMCD3 mouse cells, we demonstrate that IFT80 is absolutely required for ciliogenesis. Structural mapping and rescue experiments reveal that human disease-causing missense mutations do not cluster within IFT80 and form functional IFT particles. Unlike missense mutant forms of IFT80, deletion of the C-terminal dimerization domain prevented rescue of ciliogenesis. Taken together our results may provide a first insight into higher order IFT complex formation likely required for IFT train formation.

Data availability

The structural coordinates for IFT80 and diffraction data have been uploaded to the protein data bank (PDB).Macros used for data analysis are available for download through links provided in the material and methods part of the manuscript.

Article and author information

Author details

  1. Michael Taschner

    Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark
    Competing interests
    The authors declare that no competing interests exist.
  2. Anna Lorentzen

    Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark
    Competing interests
    The authors declare that no competing interests exist.
  3. André Mourão

    Institute of Structural Biology, Helmholtz Zentrum München, Neuherberg, Germany
    Competing interests
    The authors declare that no competing interests exist.
  4. Toby Collins

    Genetics and Genomic Medicine, University College London, London, United Kingdom
    Competing interests
    The authors declare that no competing interests exist.
  5. Grace M Freke

    Genetics and Genomic Medicine, University College London, London, United Kingdom
    Competing interests
    The authors declare that no competing interests exist.
  6. Dale Moulding

    Developmental Biology and Cancer Programmes, University College London, London, United Kingdom
    Competing interests
    The authors declare that no competing interests exist.
  7. Jerome Basquin

    Department of Structural Cell Biology, Max Planck Institute of Biochemistry, Martinsried, Germany
    Competing interests
    The authors declare that no competing interests exist.
  8. Dagan Jenkins

    Genetics and Genomic Medicine, University College London, London, United Kingdom
    For correspondence
    d.jenkins@ucl.ac.uk
    Competing interests
    The authors declare that no competing interests exist.
  9. Esben Lorentzen

    Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark
    For correspondence
    el@mbg.au.dk
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-6493-7220

Funding

Novo Nordisk (NNF15OC00114164)

  • Esben Lorentzen

Medical Research Council (MR/L009978/1)

  • Dagan Jenkins

Biotechnology and Biological Sciences Research Council (STU100044631)

  • Dagan Jenkins

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Copyright

© 2018, Taschner et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 2,179
    views
  • 397
    downloads
  • 35
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Michael Taschner
  2. Anna Lorentzen
  3. André Mourão
  4. Toby Collins
  5. Grace M Freke
  6. Dale Moulding
  7. Jerome Basquin
  8. Dagan Jenkins
  9. Esben Lorentzen
(2018)
Crystal structure of intraflagellar transport protein 80 reveals a homo-dimer required for ciliogenesis
eLife 7:e33067.
https://doi.org/10.7554/eLife.33067

Share this article

https://doi.org/10.7554/eLife.33067

Further reading

    1. Cell Biology
    2. Developmental Biology
    Sofía Suárez Freire, Sebastián Perez-Pandolfo ... Mariana Melani
    Research Article

    Eukaryotic cells depend on exocytosis to direct intracellularly synthesized material toward the extracellular space or the plasma membrane, so exocytosis constitutes a basic function for cellular homeostasis and communication between cells. The secretory pathway includes biogenesis of secretory granules (SGs), their maturation and fusion with the plasma membrane (exocytosis), resulting in release of SG content to the extracellular space. The larval salivary gland of Drosophila melanogaster is an excellent model for studying exocytosis. This gland synthesizes mucins that are packaged in SGs that sprout from the trans-Golgi network and then undergo a maturation process that involves homotypic fusion, condensation, and acidification. Finally, mature SGs are directed to the apical domain of the plasma membrane with which they fuse, releasing their content into the gland lumen. The exocyst is a hetero-octameric complex that participates in tethering of vesicles to the plasma membrane during constitutive exocytosis. By precise temperature-dependent gradual activation of the Gal4-UAS expression system, we have induced different levels of silencing of exocyst complex subunits, and identified three temporarily distinctive steps of the regulated exocytic pathway where the exocyst is critically required: SG biogenesis, SG maturation, and SG exocytosis. Our results shed light on previously unidentified functions of the exocyst along the exocytic pathway. We propose that the exocyst acts as a general tethering factor in various steps of this cellular process.

    1. Cell Biology
    2. Developmental Biology
    Heungjin Ryu, Kibum Nam ... Jung-Hoon Park
    Research Article

    In most murine species, spermatozoa exhibit a falciform apical hook at the head end. The function of the sperm hook is not yet clearly understood. In this study, we investigate the role of the sperm hook in the migration of spermatozoa through the female reproductive tract in Mus musculus (C57BL/6), using a deep tissue imaging custom-built two-photon microscope. Through live reproductive tract imaging, we found evidence indicating that the sperm hook aids in the attachment of spermatozoa to the epithelium and facilitates interactions between spermatozoa and the epithelium during migration in the uterus and oviduct. We also observed synchronized sperm beating, which resulted from the spontaneous unidirectional rearrangement of spermatozoa in the uterus. Based on live imaging of spermatozoa-epithelium interaction dynamics, we propose that the sperm hook plays a crucial role in successful migration through the female reproductive tract by providing anchor-like mechanical support and facilitating interactions between spermatozoa and the female reproductive tract in the house mouse.