Negative regulation of conserved RSL class I bHLH transcription factors evolved independently among land plants

  1. Suvi Honkanen
  2. Anna Thamm
  3. Mario A Arteaga-Vazquez
  4. Liam Dolan  Is a corresponding author
  1. University of Oxford, United Kingdom
  2. Universidad Veracruzana, Mexico

Abstract

Basic helix-loop-helix transcription factors encoded by RSL class I genes control a gene regulatory network that positively regulates the development of filamentous rooting cells - root hairs and rhizoids - in land plants. The GLABRA2 transcription factor negatively regulates these genes in the angiosperm Arabidopsis thaliana. To find negative regulators of RSL class I genes in early diverging land plants we conducted a mutant screen in the liverwort Marchantia polymorpha. This identified FEW RHIZOIDS1 (MpFRH1) microRNA (miRNA) that negatively regulates the RSL class I gene MpRSL1. The miRNA and its mRNA target constitute a feedback mechanism that controls epidermal cell differentiation. MpFRH1 miRNA target sites are conserved among liverwort RSL class I mRNAs but are not present in RSL class I mRNAs of other land plants. These findings indicate that while RSL class I genes are ancient and conserved, independent negative regulatory mechanisms evolved in different lineages during land plant evolution.

Data availability

All data generated or analysed during this study are included in the manuscript and supporting files.

The following previously published data sets were used

Article and author information

Author details

  1. Suvi Honkanen

    Department of Plant Sciences, University of Oxford, Oxford, United Kingdom
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-3923-3365
  2. Anna Thamm

    Department of Plant Sciences, University of Oxford, Oxford, United Kingdom
    Competing interests
    The authors declare that no competing interests exist.
  3. Mario A Arteaga-Vazquez

    Instituto de Biotecnología y Ecología Aplicada, Universidad Veracruzana, Veracruz, Mexico
    Competing interests
    The authors declare that no competing interests exist.
  4. Liam Dolan

    Department of Plant Sciences, University of Oxford, Oxford, United Kingdom
    For correspondence
    liam.dolan@plants.ox.ac.uk
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-1206-7096

Funding

European Commission (EVO-500 25028)

  • Suvi Honkanen
  • Liam Dolan

Biotechnology and Biological Sciences Research Council (BB/F016093/1)

  • Suvi Honkanen
  • Anna Thamm

University of Oxford EPA Cephalosporin scholarship

  • Anna Thamm

University of California Institute for Mexico and the United States (UCMEXUS-19941-44-OAC7)

  • Mario A Arteaga-Vazquez

The Royal Society Newton Advanced Fellowship (NA150181 RG79985)

  • Mario A Arteaga-Vazquez

Biotechnology and Biological Sciences Research Council (J0144271/1)

  • Suvi Honkanen
  • Anna Thamm

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Reviewing Editor

  1. Daniel J Kliebenstein, University of California, Davis, United States

Version history

  1. Received: May 21, 2018
  2. Accepted: August 22, 2018
  3. Accepted Manuscript published: August 23, 2018 (version 1)
  4. Version of Record published: September 17, 2018 (version 2)

Copyright

© 2018, Honkanen et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

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  1. Suvi Honkanen
  2. Anna Thamm
  3. Mario A Arteaga-Vazquez
  4. Liam Dolan
(2018)
Negative regulation of conserved RSL class I bHLH transcription factors evolved independently among land plants
eLife 7:e38529.
https://doi.org/10.7554/eLife.38529

Share this article

https://doi.org/10.7554/eLife.38529

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