The source data for all figures and tables are included in available in Supplementary file 1 and/or the NCBI Sequence Read Archive (BioProject numbers indicated in Table 1 and individual sample accession numbers indicated in Supplementary file 1).
NCBI Sequence Read ArchiveID SRP185594. Bridging of Neisseria Gonorrhoeae Across Diverse Sexual Networks in the HIV Pre-Exposure Prophylaxis (PrEP) Era: A Clinical and Molecular Epidemiological Study.
NCBI Sequence Read ArchiveID ERP010312. Public health surveillance of multidrug-resistant clones of Neisseria gonorrhoeae in Europe: a genomic survey.
NCBI Sequence Read ArchiveID DRP004052. Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial-resistance determinants and lineages.
NCBI Sequence Read ArchiveID SRP111927. Genomic epidemiology and antimicrobial resistance of Neisseria gonorrhoeae in New Zealand.
NCBI Sequence Read ArchiveID ERP011192. Using genomics to understand transmission networks of Neisseria gonorrhoeae in New York City.
Supplementary file 1
Supplementary file 2
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