Defective apoptotic cell contractility provokes sterile inflammation, leading to liver damage and tumour suppression

  1. Linda Julian
  2. Gregory Naylor
  3. Grant R Wickman
  4. Nicola Rath
  5. Giovanni Castino
  6. David Stevenson
  7. Sheila Bryson
  8. June Munro
  9. Lynn McGarry
  10. Margaret Mullin
  11. Alistair Rice
  12. Armandodel Del Río Hernández
  13. Michael F Olson  Is a corresponding author
  1. Cancer Research United Kingdom Beatson Institute, Garscube Estate, United Kingdom
  2. Institute of Cancer Sciences, University of Glasgow, United Kingdom
  3. Department of Chemistry and Biology, Ryerson University, Canada
  4. Electron Microscopy Facility, School of Life Sciences, University of Glasgow, United Kingdom
  5. Cellular and Molecular Biomechanics Laboratory, Department of Bioengineering, Imperial College London, United Kingdom
8 figures, 2 videos, 1 table and 1 additional file

Figures

Figure 1 with 3 supplements
ROCK1 cleavage is essential for increased myosin light chain (MLC) phosphorylation during apoptosis.

(A) Representative western blot showing Myc-tagged ROCK1 immunoprecipitated from transfected HEK293T cells assayed in vitro for MLC phosphorylation (pMLC) without (-) or with (+) cleavage by …

Figure 1—figure supplement 1
Uncropped western blots and in-cell westerns.

(A) Uncropped western blot panels for Figure 1A, boxes with dashed border indicating regions used for the composite. (B) Uncropped in-cell westerns for Figure 1B, boxes with dashed border indicating …

Figure 1—figure supplement 2
Homologous recombination targeting strategy to generate ROCK1 non-cleavable allele.

(A) Line diagram of mouse genomic Rock1 wild-type (ROCK1wt) locus with numbered Rock1 exons indicated by blue boxes (top). Targeting vector homology arms to Rock1 wild-type locus is indicated by …

Figure 1—figure supplement 3
Example fluorescence-activated cell sorting (FACS) determination of ROCK1wt and ROCK1nc mouse embryo fibroblast (MEF) apoptosis.

Representative FACS dot plots of ROCK1wt and ROCK1nc MEFs that were untreated or treated with tumour necrosis factor α (TNFα) and cycloheximide (CHX) for 4 hr. Cells were stained with …

Figure 2 with 1 supplement
Apoptotic ROCK1nc mouse embryo fibroblasts (MEFs) do not undergo forceful contraction.

(A) Homozygous ROCK1wt (upper panels) or ROCK1nc (lower panels) MEFs were serum-starved overnight, then treated with tumour necrosis factor α (TNFα) (50 ng/mL) plus cycloheximide (CHX) (10 µg/mL) to …

Figure 2—figure supplement 1
Characterization of ROCK1wt and ROCK1nc mouse embryo fibroblasts (MEFs).

(A) Cell numbers after plating 4 × 103 ROCK1wt and ROCK1nc MEFs at daily intervals up to 4 days. Means ± standard deviation, n = 5 independent replicates. (B) Example images used for high content …

Figure 3 with 2 supplements
Elevated chemically induced liver damage in ROCK1nc mice.

(A) Terminal deoxynucleotidyl transferase dUTP nick end labelling (TUNEL) staining of apoptotic cells in representative liver sections from ROCK1wt or ROCK1nc mice 72 hr after diethylnitrosamine (DEN…

Figure 3—figure supplement 1
Absence of indications of autoimmunity in aged ROCK1wt or ROCK1nc kidneys or spleens.

(A) Representative periodic acid-Schiff (PAS)-stained kidney sections from ROCK1wt and ROCK1nc mice showing no observable differences in basement membrane thickening (white arrows). Scale bars …

Figure 3—figure supplement 2
Ageing does not affect blood cells, liver or spleen masses differently in ROCK1wt or ROCK1nc mice.

Numbers of (A) red blood cells, (B) white blood cells, (C) neutrophils, (D) lymphocytes, (E) monocytes, (F) eosinophils, or (G) platelets in ROCK1wt or ROCK1nc mice 10 weeks (ROCK1wt n = 11 mice; …

Higher neutrophil infiltration in chemically damaged ROCK1nc livers.

(A) Immunohistochemical (IHC) staining with F4/80 antibody of formalin-fixed paraffin-embedded (FFPE) liver sections from homozygous ROCK1wt (WT) or ROCK1nc (NC) mice 72 hr after diethylnitrosamine (…

Inhibition of high-mobility group B1 (HMGB1) signalling reduces diethylnitrosamine (DEN)-induced liver damage.

(A) Immunohistochemical (IHC) staining with anti-HMGB1 antibody of formalin-fixed paraffin-embedded (FFPE) liver sections from homozygous ROCK1wt (WT) or ROCK1nc (NC) mice 72 hr after DEN injection. …

Diethylnitrosamine (DEN)-induced hepatocellular carcinoma (HCC) tumour numbers are lower in ROCK1nc mice.

(A) Timeline of DEN-induced HCC protocol. (B) Macroscopic view of representative livers from ROCK1wt and ROCK1nc mice 9 months after HCC initiation with DEN. Scale bars = 1 cm. (C) Tumour numbers …

Figure 7 with 1 supplement
Similar liver mass and tumour grades in diethylnitrosamine (DEN)-treated ROCK1wt and ROCK1nc mice.

(A) Liver mass, (B) body mass and (C) liver to body ratios for ROCK1wt and ROCK1nc mice (n = 12 mice for each genotype) 9 months after hepatocellular carcinoma (HCC) initiation with DEN. Boxes …

Figure 7—figure supplement 1
Histopathological features of diethylnitrosamine (DEN)-induced hepatocellular carcinoma (HCC).

Representative H&E-stained liver sections from mice with DEN-induced HCC showing (A) tumour border (dotted line), (B) trabecular pattern (arrow), (C) macrotrabecular structures (arrow), (D) compact …

Figure 8 with 1 supplement
Glycyrrhizin (GLZ) increases diethylnitrosamine (DEN)-induced liver tumour number in ROCK1nc mice.

(A) Timeline of the DEN-induced hepatocellular carcinoma (HCC) and GLZ treatment protocol. (B) The number of liver tumours in ROCK1nc mice 9 months after treatment with GLZ alone (n = 10 mice) or …

Figure 8—figure supplement 1
Similar liver mass in ROCK1nc mice treated with diethylnitrosamine (DEN) and glycyrrhizin (GLZ).

(A) Liver mass, (B) body mass and (C) liver to body mass ratios for ROCK1nc mice 9 months after treatment with GLZ alone (n = 10 mice) or following hepatocellular carcinoma (HCC) initiation with DEN …

Videos

Video 1
Time lapse of apoptotic ROCKwt mouse embryo fibroblasts (MEFs).

ROCK1wt MEFs were plated on 6-well glass-bottom dishes at a density of 2 × 106 cells per well. Cells were serum-starved overnight prior to induction of apoptosis with tumour necrosis factor α (TNFα) …

Video 2
Time lapse of apoptotic ROCKnc mouse embryo fibroblasts (MEFs).

ROCK1nc MEFs were plated on 6-well glass-bottom dishes at a density of 2 × 106 cells per well. Cells were serum-starved overnight prior to induction of apoptosis with tumour necrosis factor α (TNFα) …

Tables

Table 1
Conservation of ROCK1 caspase cleavage site.
Mammals
Homo sapiensQLRAKLLDLSDSTSVASFPSADETDGNLP
ChimpQLRAKLLDLSDSTSVASFPSADETDGNLP
GorillaQLRAKLLDLSDSTSVASFPSADETDGNLP
OrangutanQLRAKLLDLSDSTSVASFPSADETDGNLP
GibbonQLRAKLLDLSDSTSVASFPSADETDGNLP
RhesusQLRAKLLDLSDSTSVASFPSADETDGNLP
Crab-eating macaqueQLRAKLLDLSDSTSVASFPSADETDGNLP
BaboonQLRAKLLDLSDSTSVASFPSADETDGNLP
Green monkeyQLRAKLLDLSDSTSVASFPSADETDGNLP
MarmosetQLRAKLLDLSDSTSVASFPSADETDGNLP
Squirrel monkeyQLRAKLLDLSDSTSVASFPSADETDGNLP
BushbabyQLRAKLLDLSDSTSVASFPSADETDGNLP
Chinese tree shrewQLRAKLLDLSDSTSVASFPSADETDGNLP
SquirrelQLRAKLLDLSDSTSVASFPSADETDGNLP
Lesser Egyptian jerboaQLRAKLLDLSDSTSVASFPSADETDGSLP
Prairie voleQLRAKLLDLSDSTSVASFPSADETDGNLP
Chinese hamsterQLRAKLLDLSDSTSIASFPSADETDGNLP
Golden hamsterQLRAKLLDLSDSTSVASFPSADETDGNLP
MouseQLRAKLLDLSDSTSVASFPSADETDGNLP
RatQLRAKLLDLSDSTSVASFPSADETDGNLP
Naked mole-ratQLRAKLLDLSDSTSVASFPSADETDGNLP
Guinea pigQLRAKLLDLSDSTSVASFPSADETDGNLP
ChinchillaQLRAKLLDLSDSTSVASFPSADETDGNLP
Brush-tailed ratQLRAKLLDLSDSTSVASFPSADETDGNLP
RabbitQLRAKLSDLSDSTSVASFPSADETDGNLP
PikaQLRAKLLDLSDSTSVASFPSTDEaDGNLP
PigQLRAKLLDLSDSTSVASFPSADETDGNLP
AlpacaQLRAKLLDLSDSTSVASFPSADETDGNLP
Bactrian camelQLRAKLLDLSDSTSVASFPSADETDGNLP
DolphinQLRAKLLDLSDSTSVASFPSADETDGNLP
Killer whaleQLRAKLLDLSDSTSVASFPSADETDGNLP
Tibetan antelopeQLRAKLLDLSDSTSVASFPSADETDGNLP
CowQLRAKLLDLSDSTSVASFPSADETDGNLP
SheepQLRAKLLDLSDSTSVASFPSADETDGNLP
Domestic goatQLRAKLLDLSDSTSVASFPSADETDGNLS
HorseQLRAKLLDLSDSTSVASFPSADETDGNLP
White rhinocerosQLRAKLLDLSDSTSVASFPSADETDGNLP
CatQLRAKLLDLSDSTSVASFPSADETDGNLP
DogQLRAKLLDLSDSTSIASFPSADETDGNLP
FerretQLRAKLLDLSDSTSVASFPSADETDGNLP
PandaQLRAKLLDLSDSTSVASFPSADETDGNLP
Pacific walrusQLRAKLLDLSDSTSVASFPSADETDGNLP
Weddell sealQLRAKLLDLSDSTSVASFPSADETDGNLP
Black flying-foxQLRAKLLDLSDSTSVASFPSADETDGNLP
MegabatQLRAKLLDLSDSTSVASFPSADETDGNLP
David’s myotis (bat)QLRAKLLDLSDSTSVASFPSADETDGNLP
MicrobatQLRAKLLDLSDSTSVASFPSADETDGNLP
Big brown batQLRAKLLDLSDSTSVASFPSADETDGNLP
HedgehogQLRAKLLDLADSTSVASFPSADETDGNLP
ShrewQLRSKLLDLSDSTSVASFPSADETDGTLP
Star-nosed moleQLRAKLLDLSDSTSVASFPSADETDGNLP
ElephantQLRAKLLDLSDSTSVASFPSADETDGNLP
Cape elephant shrewQLRAKLLDLSDSTSVASFPSADETDGSLP
ManateeQLRAKLLDLSDSTSVASFPSADETDGNLP
Cape golden moleQLRAKLLDLSDSTSVASFPSADETDGNLP
TenrecQLRAKLLDLSDSTSVASFPSADETDGNLP
AardvarkQLRAKLLDLSDSTSVASFPSADETDGNLP
ArmadilloQLRAKLLDLSDSTSVASFPSADETDGNLP
OpossumQLRAKLLDLSDSTSVTSFPSADETDGNLP
Tasmanian devilQLRAKLLDLSDSTSVTSFPSADETDGNLP
WallabyQLRSKLSDLLDSGSVASL-S-DETDGNLV
platypusQLRRKILDLLDSTSVASLQ--DETDGNLS
Birds
Saker falconQLRRKILDLLDSTSVASLQ--DETDGNLS
Peregrine falconQLRRKIMDLLDSTSVASLP--DEmDGNLP
Collared flycatcherQLRRKIMDLLDSTSVASLP--DETDGNLS
White-throated sparrowQLRRKIMDLLDSTSVASLP--DETDGNLS
Medium ground finchQLRRKIMDLLDSTSVASLP--DETDGNLS
Zebra finchQLRRKIMDLLDSTSVASLP--DETDGNLS
Tibetan ground jayQLRRKILDLLDSTSVASLQ--DETDGNLS
BudgerigarQLRRKILDLLDSTSVASLQ--DETDGNLS
ParrotQLRRKILDLLDSTSVASLQ--DETDGNLS
Scarlet macawQLRRKILDLLDSTSVASLQ--DETDGNLS
Rock pigeonQLRRKILDLLDSTSVASLP--DETDGNLS
Mallard duckQLRRKILDLLDSTSVASLQ--DETDGNLS
ChickenQLRRKILDLLDSTSVSSLQ--DEiDGNLS
TurkeyQLRRKILDLLDSTSVSSLQ--DEiDGNLS
Sarcopterygii
American alligatorQLRSKILDLLDSTSVASLQ--DETDGNVS
Green seaturtleQLRSKILDLLDSTSVASLQ--DETDGNLT
Painted turtleQLRSKLLDLLDSTSVASLQ--DETDGNLT
Chinese softshell turtleQLRSKILDLLDSASVASLQ--DETDGNLT
Spiny softshell turtleQLRSKILDLLDSASVASLQ--DETDGNLT
LizardQLRSKILDLLDSTSVASLP--DETDGNIV
X. tropicalisQLRARLADLLDSTSVASLQ--DdTDGIIG
CoelacanthQLRAKLMDLLDNTSVASLQ--DEvDGNVI
Fish
TetraodonQLREKLNDLLDNSSITSLQ--DETDSNIA
FuguQLREKLNDLLDNSSITSLQ--DETDSNIA
Yellowbelly pufferfishQLREKLNDLLDNSSITSLQ--DETDSNIA
Nile tilapiaQLREKLNDLLDNSSVTSLQ--DETDSNIA
Princess of BurundiQLREKLNDLLDNSSVTSLQ--DETDSNIA
Burton's mouthbreederQLREKLNDLLDNSSVTSLQ--DETDSNIA
Zebra mbunaQLREKLNDLLDNSSVTSLQ--DETDSNIA
Pundamilia nyerereiQLREKLNDLLDNSSVTSLQ--DETDSNIA
MedakaQLREKLNDMLENSSITSLQ--DETDSNIA
Southern platyfishQLREKLSDLLENSSVTSLQ--DETDSNTA
SticklebackQLREKLNDLLDTSSVTSLQ--DETDGNIA
Atlantic codQLREKLNDLLDSSSVTSLL--DETDGNLA
ZebrafishQLREKLNDLLDNSSVTSLQ--DElDSNIA
Spotted garQLREKLNDLLDNSSVASLQ--DEaDGNIA
  1. Protein sequences orthologous to human ROCK1 were aligned in 93 vertebrate species using Multiz Alignment (Blanchette et al., 2004) in the UCSC Genome Browser. These include representative species from the major classes: 62 mammals, 14 birds, 8 Sarcopterygii and 14 fish. The conserved caspase cleavage site indicated with underlined bold typeface, with non-identical amino acids in lowercase.

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