De novo synthesized polyunsaturated fatty acids operate as both host immunomodulators and nutrients for Mycobacterium tuberculosis

  1. Thomas Laval
  2. Laura Pedró-Cos
  3. Wladimir Malaga
  4. Laure Guenin-Macé
  5. Alexandre Pawlik
  6. Véronique Mayau
  7. Hanane Yahia-Cherbal
  8. Océane Delos
  9. Wafa Frigui
  10. Justine Bertrand-Michel
  11. Christophe Guilhot
  12. Caroline Demangel  Is a corresponding author
  1. Institut Pasteur, France
  2. Institut de Pharmacologie et de Biologie Structurale (IPBS), CNRS UMR5089, France
  3. IFR 150, INSERM, France

Abstract

Successful control of Mycobacterium tuberculosis (Mtb) infection by macrophages relies on immunometabolic reprogramming, where the role of fatty acids (FAs) remains poorly understood. Recent studies unraveled Mtb's capacity to acquire saturated and monounsaturated FAs via the Mce1 importer. However upon activation, macrophages produce polyunsaturated FAs (PUFAs), mammal-specific FAs mediating the generation of immunomodulatory eicosanoids. Here, we asked how Mtb modulates de novo synthesis of PUFAs in primary mouse macrophages and whether this benefits host or pathogen. Quantitative lipidomics revealed that Mtb infection selectively activates the biosynthesis of w6 PUFAs upstream of the eicosanoid precursor arachidonic acid (AA), via transcriptional activation of Fads2. Inhibiting FADS2 in infected macrophages impaired their inflammatory and antimicrobial responses but had no effect on Mtb growth in mice. Using a click-chemistry approach, we found that Mtb efficiently imports w6 PUFAs via Mce1 in axenic culture, including AA. Further, Mtb preferentially internalized AA over all other FAs within infected macrophages, by mechanisms partially depending on Mce1 and supporting intracellular persistence. Notably, IFNγ repressed de novo synthesis of AA by infected mouse macrophages and restricted AA import by intracellular Mtb. Together, these findings identify AA as a major FA substrate for intracellular Mtb, whose mobilization by innate immune responses is opportunistically hijacked by the pathogen and downregulated by IFNγ.

Data availability

All data analysed during this study are included in the manuscript and supporting files.

Article and author information

Author details

  1. Thomas Laval

    Immunobiology of Infection Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-9359-2783
  2. Laura Pedró-Cos

    Immunobiology of Infection Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  3. Wladimir Malaga

    Institut de Pharmacologie et de Biologie Structurale (IPBS), CNRS UMR5089, Toulouse, France
    Competing interests
    The authors declare that no competing interests exist.
  4. Laure Guenin-Macé

    Immunobiology of Infection Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  5. Alexandre Pawlik

    Integrated Mycobacterial Pathogenomics Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-5680-576X
  6. Véronique Mayau

    Immunobiology of Infection Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  7. Hanane Yahia-Cherbal

    Immunoregulation Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  8. Océane Delos

    IFR 150, INSERM, Toulouse, France
    Competing interests
    The authors declare that no competing interests exist.
  9. Wafa Frigui

    Integrated Mycobacterial Pathogenomics Unit, Institut Pasteur, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  10. Justine Bertrand-Michel

    IFR 150, INSERM, Toulouse, France
    Competing interests
    The authors declare that no competing interests exist.
  11. Christophe Guilhot

    Institut de Pharmacologie et de Biologie Structurale (IPBS), CNRS UMR5089, Toulouse, France
    Competing interests
    The authors declare that no competing interests exist.
  12. Caroline Demangel

    Immunobiology of Infection Unit, Institut Pasteur, Paris, France
    For correspondence
    demangel@pasteur.fr
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-7848-586X

Funding

The authors declare that there was no external funding for this work.

Ethics

Animal experimentation: All animal experiments were performed in agreement with European and French guidelines (Directive 86/609/CEE and Decree 87- 848 of 19 October 1987). The study received the approval by the Institut Pasteur Safety Committee (Protocol 11.245) and the ethical approval by the local ethical committee "Comité d'Ethique en Experimentation Animale N{degree sign} 89 (CETEA)" (CETEA 200037 / APAFiS #27688).

Copyright

© 2021, Laval et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 2,024
    views
  • 317
    downloads
  • 11
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Thomas Laval
  2. Laura Pedró-Cos
  3. Wladimir Malaga
  4. Laure Guenin-Macé
  5. Alexandre Pawlik
  6. Véronique Mayau
  7. Hanane Yahia-Cherbal
  8. Océane Delos
  9. Wafa Frigui
  10. Justine Bertrand-Michel
  11. Christophe Guilhot
  12. Caroline Demangel
(2021)
De novo synthesized polyunsaturated fatty acids operate as both host immunomodulators and nutrients for Mycobacterium tuberculosis
eLife 10:e71946.
https://doi.org/10.7554/eLife.71946

Share this article

https://doi.org/10.7554/eLife.71946

Further reading

    1. Immunology and Inflammation
    Josep Garnica, Patricia Sole ... Pere Santamaria
    Research Article

    Chronic antigenic stimulation can trigger the formation of interleukin 10 (IL-10)-producing T-regulatory type 1 (TR1) cells in vivo. We have recently shown that murine T-follicular helper (TFH) cells are precursors of TR1 cells and that the TFH-to-TR1 cell transdifferentiation process is characterized by the progressive loss and acquisition of opposing transcription factor gene expression programs that evolve through at least one transitional cell stage. Here, we use a broad range of bulk and single-cell transcriptional and epigenetic tools to investigate the epigenetic underpinnings of this process. At the single-cell level, the TFH-to-TR1 cell transition is accompanied by both, downregulation of TFH cell-specific gene expression due to loss of chromatin accessibility, and upregulation of TR1 cell-specific genes linked to chromatin regions that remain accessible throughout the transdifferentiation process, with minimal generation of new open chromatin regions. By interrogating the epigenetic status of accessible TR1 genes on purified TFH and conventional T-cells, we find that most of these genes, including Il10, are already poised for expression at the TFH cell stage. Whereas these genes are closed and hypermethylated in Tconv cells, they are accessible, hypomethylated, and enriched for H3K27ac-marked and hypomethylated active enhancers in TFH cells. These enhancers are enriched for binding sites for the TFH and TR1-associated transcription factors TOX-2, IRF4, and c-MAF. Together, these data suggest that the TR1 gene expression program is genetically imprinted at the TFH cell stage.

    1. Genetics and Genomics
    2. Immunology and Inflammation
    Stephanie Guillet, Tomi Lazarov ... Frédéric Geissmann
    Research Article

    Systemic lupus erythematosus (SLE) is an autoimmune disease, the pathophysiology and genetic basis of which are incompletely understood. Using a forward genetic screen in multiplex families with SLE, we identified an association between SLE and compound heterozygous deleterious variants in the non-receptor tyrosine kinases (NRTKs) ACK1 and BRK. Experimental blockade of ACK1 or BRK increased circulating autoantibodies in vivo in mice and exacerbated glomerular IgG deposits in an SLE mouse model. Mechanistically, NRTKs regulate activation, migration, and proliferation of immune cells. We found that the patients’ ACK1 and BRK variants impair efferocytosis, the MERTK-mediated anti-inflammatory response to apoptotic cells, in human induced pluripotent stem cell (hiPSC)-derived macrophages, which may contribute to SLE pathogenesis. Overall, our data suggest that ACK1 and BRK deficiencies are associated with human SLE and impair efferocytosis in macrophages.