Evolutionary conservation of centriole rotational asymmetry in the human centrosome

  1. Noémie Gaudin
  2. Paula Martin Gil
  3. Meriem Boumendjel
  4. Dmitry Ershov
  5. Catherine Pioche-Durieu
  6. Manon Bouix
  7. Quentin Delobelle
  8. Lucia Maniscalco
  9. Than Bich Ngan Phan
  10. Vincent Heyer
  11. Bernardo Reina-San-Martin
  12. Juliette Azimzadeh  Is a corresponding author
  1. Institut Jacques Monod, France
  2. Institut Pasteur, USR 3756 CNRS, France
  3. Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), France

Abstract

Centrioles are formed by microtubule triplets in a nine-fold symmetric arrangement. In flagellated protists and in animal multiciliated cells, accessory structures tethered to specific triplets render the centrioles rotationally asymmetric, a property that is key to cytoskeletal and cellular organization in these contexts. In contrast, centrioles within the centrosome of animal cells display no conspicuous rotational asymmetry. Here, we uncover rotationally asymmetric molecular features in human centrioles. Using ultrastructure expansion microscopy, we show that LRRCC1, the ortholog of a protein originally characterized in flagellate green algae, associates preferentially to two consecutive triplets in the distal lumen of human centrioles. LRRCC1 partially co-localizes and affects the recruitment of another distal component, C2CD3, which also has an asymmetric localization pattern in the centriole lumen. Together, LRRCC1 and C2CD3 delineate a structure reminiscent of a filamentous density observed by electron microscopy in flagellates, termed the 'acorn'. Functionally, the depletion of LRRCC1 in human cells induced defects in centriole structure, ciliary assembly and ciliary signaling, supporting that LRRCC1 cooperates with C2CD3 to organizing the distal region of centrioles. Since a mutation in the LRRCC1 gene has been identified in Joubert syndrome patients, this finding is relevant in the context of human ciliopathies. Taken together, our results demonstrate that rotational asymmetry is an ancient property of centrioles that is broadly conserved in human cells. Our work also reveals that asymmetrically localized proteins are key for primary ciliogenesis and ciliary signaling in human cells.

Data availability

All data generated or analyzed during this study are included in the manuscript and supporting files. Source data files are available from the Dryad database (doi:10.5061/dryad.95x69p8m5).

The following data sets were generated

Article and author information

Author details

  1. Noémie Gaudin

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  2. Paula Martin Gil

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  3. Meriem Boumendjel

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  4. Dmitry Ershov

    Département Biologie Computationnelle, Institut Pasteur, USR 3756 CNRS, France, France
    Competing interests
    The authors declare that no competing interests exist.
  5. Catherine Pioche-Durieu

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-0988-1169
  6. Manon Bouix

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  7. Quentin Delobelle

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  8. Lucia Maniscalco

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  9. Than Bich Ngan Phan

    Institut Jacques Monod, Paris, France
    Competing interests
    The authors declare that no competing interests exist.
  10. Vincent Heyer

    Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Ilkirch, France
    Competing interests
    The authors declare that no competing interests exist.
  11. Bernardo Reina-San-Martin

    Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Ilkirch, France
    Competing interests
    The authors declare that no competing interests exist.
  12. Juliette Azimzadeh

    Institut Jacques Monod, Paris, France
    For correspondence
    juliette.azimzadeh@ijm.fr
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-7292-9973

Funding

Agence Nationale de la Recherche (ANR-21-CE13-008)

  • Juliette Azimzadeh

Fondation pour la Recherche Médicale (Graduate Student Fellowship)

  • Noémie Gaudin

Fondation ARC pour la Recherche sur le Cancer (Dotation)

  • Juliette Azimzadeh

Ligue Contre le Cancer (Dotation)

  • Juliette Azimzadeh

Labex Who Am I?

  • Juliette Azimzadeh

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Copyright

© 2022, Gaudin et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 1,860
    views
  • 413
    downloads
  • 12
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Noémie Gaudin
  2. Paula Martin Gil
  3. Meriem Boumendjel
  4. Dmitry Ershov
  5. Catherine Pioche-Durieu
  6. Manon Bouix
  7. Quentin Delobelle
  8. Lucia Maniscalco
  9. Than Bich Ngan Phan
  10. Vincent Heyer
  11. Bernardo Reina-San-Martin
  12. Juliette Azimzadeh
(2022)
Evolutionary conservation of centriole rotational asymmetry in the human centrosome
eLife 11:e72382.
https://doi.org/10.7554/eLife.72382

Share this article

https://doi.org/10.7554/eLife.72382

Further reading

    1. Cell Biology
    2. Physics of Living Systems
    David Trombley McSwiggen, Helen Liu ... Hilary P Beck
    Research Article

    The regulation of cell physiology depends largely upon interactions of functionally distinct proteins and cellular components. These interactions may be transient or long-lived, but often affect protein motion. Measurement of protein dynamics within a cellular environment, particularly while perturbing protein function with small molecules, may enable dissection of key interactions and facilitate drug discovery; however, current approaches are limited by throughput with respect to data acquisition and analysis. As a result, studies using super-resolution imaging are typically drawing conclusions from tens of cells and a few experimental conditions tested. We addressed these limitations by developing a high-throughput single-molecule tracking (htSMT) platform for pharmacologic dissection of protein dynamics in living cells at an unprecedented scale (capable of imaging >106 cells/day and screening >104 compounds). We applied htSMT to measure the cellular dynamics of fluorescently tagged estrogen receptor (ER) and screened a diverse library to identify small molecules that perturbed ER function in real time. With this one experimental modality, we determined the potency, pathway selectivity, target engagement, and mechanism of action for identified hits. Kinetic htSMT experiments were capable of distinguishing between on-target and on-pathway modulators of ER signaling. Integrated pathway analysis recapitulated the network of known ER interaction partners and suggested potentially novel, kinase-mediated regulatory mechanisms. The sensitivity of htSMT revealed a new correlation between ER dynamics and the ability of ER antagonists to suppress cancer cell growth. Therefore, measuring protein motion at scale is a powerful method to investigate dynamic interactions among proteins and may facilitate the identification and characterization of novel therapeutics.

    1. Cell Biology
    Hongqian Chen, Hui-Qing Fang ... Peng Liu
    Tools and Resources

    The FSH-FSHR pathway has been considered an essential regulator in reproductive development and fertility. But there has been emerging evidence of FSHR expression in extragonadal organs. This poses new questions and long-term debates regarding the physiological role of the FSH-FSHR, and underscores the need for reliable, in vivo analysis of FSHR expression in animal models. However, conventional methods have proven insufficient for examining FSHR expression due to several limitations. To address this challenge, we developed Fshr-ZsGreen reporter mice under the control of Fshr endogenous promoter using CRISPR-Cas9. With this novel genetic tool, we provide a reliable readout of Fshr expression at single-cell resolution level in vivo and in real time. Reporter animals were also subjected to additional analyses,to define the accurate expression profile of FSHR in gonadal and extragonadal organs/tissues. Our compelling results not only demonstrated Fshr expression in intragonadal tissues but also, strikingly, unveiled notably increased expression in Leydig cells, osteoblast lineage cells, endothelial cells in vascular structures, and epithelial cells in bronchi of the lung and renal tubes. The genetic decoding of the widespread pattern of Fshr expression highlights its physiological relevance beyond reproduction and fertility, and opens new avenues for therapeutic options for age-related disorders of the bones, lungs, kidneys, and hearts, among other tissues. Exploiting the power of the Fshr knockin reporter animals, this report provides the first comprehensive genetic record of the spatial distribution of FSHR expression, correcting a long-term misconception about Fshr expression and offering prospects for extensive exploration of FSH-FSHR biology.