Study of efficacy and longevity of immune response to 3rd and 4th doses of COVID-19 vaccines in patients with cancer: a single arm clinical trial

Abstract

Background: Cancer patients show increased morbidity with COVID-19 and need effective immunization strategies. Many healthcare regulatory agencies recommend administering 'booster' doses of COVID-19 vaccines beyond the standard 2-dose series, for this group of patients. Therefore, studying the efficacy of these additional vaccine doses against SARS-CoV-2 and variants of concern is of utmost importance in this immunocompromised patient population.

Methods: We conducted a prospective single arm clinical trial enrolling patients with cancer that had received two doses of mRNA or one dose of AD26.CoV2.S vaccine and administered a 3rd dose of mRNA vaccine. We further enrolled patients that had no or low responses to three mRNA COVID vaccines and assessed the efficacy of a 4th dose of mRNA vaccine. Efficacy was assessed by changes in anti-spike antibody, T-cell activity and neutralization activity were again assessed at baseline and 4 weeks.

Results: We demonstrate that a 3rd dose of COVID-19 vaccine leads to seroconversion in 57% of patients that were seronegative after primary vaccination series. The immune response is durable as assessed by anti-S antibody titers, T-cell activity and neutralization activity against wild-type SARS-CoV2 and BA1.1.529 at 6 months of follow up. A subset of severely immunocompromised hematologic malignancy patients that were unable to mount an adequate immune response (titer <1000 AU/mL) after the 3rd dose and were treated with a 4th dose in a prospective clinical trial which led to adequate immune-boost in 67% of patients. Low baseline IgM levels and CD19 counts were associated with inadequate seroconversion. Booster doses induced limited neutralization activity against the Omicron variant.

Conclusions: These results indicate that 3rd dose of COVID vaccine induces durable immunity in cancer patients and an additional dose can further stimulate immunity in a subset of patients with inadequate response.

Funding: Leukemia lymphoma society, National Cancer Institute.

Clinical trial identifier: NCT05016622.

Data availability

The data for this clinical trial contains protected health information for the participants that includes a large amount of information as to specific dates/treatments/cancer diagnoses. Therefore, it is prudent to protect this information and it does not seem appropriate to put the information out in the public domain. For example- patients' specific cancer diagnoses, treatment received, COVID-19 vaccine dates can be viewed as sensitive information in the aggregate. If we remove this detailed information from the dataset then the dataset would end up being very limited and not useful for any researcher. Therefore, we believe that making the dataset available through the corresponding author based on individual well-supported requests will allow researchers access to complete data while protecting potentially identifiable patient-level information from the public domain. We are more than happy to share the deidentified database with the reviewers/editors (for review purposes only). If an interested researcher wishes to acquire the data, the aforementioned de-identified dataset can be made available by contacting the corresponding author of the study. While there are no restrictions on data usage per se, we request that future research be done in accordance with standardized guidelines and with local ethics approval. The code is already deposited in GitHubCode availability statement : Computer code has been deposited in GitHub and can be found at https://github.com/kith-pradhan/CovidBooster and https://github.com/kith-pradhan/CovidBooster4th

Article and author information

Author details

  1. Astha Thakkar

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-7778-0752
  2. Kith Pradhan

    Department of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  3. Benjamin Duva

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  4. Juan Manuel Carreno

    Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, United States
    Competing interests
    No competing interests declared.
  5. Srabani Sahu

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  6. Victor Thiruthuvanathan

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  7. Sean Campbell

    Department of Pathology, Montefiore Medical Center, Bronx, United States
    Competing interests
    No competing interests declared.
  8. Sonia Gallego

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  9. Tushar D Bhagat

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  10. Johanna Rivera

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  11. Gaurav Choudhary

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-5365-6706
  12. Raul Olea

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  13. Maite Sabalza

    Euroimmun, Mountain Lakes, United States
    Competing interests
    Maite Sabalza, is affiliated with EUROIMMUN and has no financial interests to declare..
  14. Lauren C Shapiro

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  15. Matthew Lee

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  16. Ryann Quinn

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  17. Ioannis Mantzaris

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  18. Edward Chu

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  19. Britta Will

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  20. Liise-anne Pirofski

    Department of Medicine, Albert Einstein College of Medicine, Bronx, United States
    Competing interests
    No competing interests declared.
  21. Florian Krammer

    Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, United States
    Competing interests
    Florian Krammer, The Icahn School of Medicine at Mount Sinai has filed patent applications relating to SARS-CoV-2 serological assays and NDV-based SARS-CoV-2 vaccines which list Florian Krammer as co-inventor. Mount Sinai has spun out a company, Kantaro, to market serological tests for SARS-CoV-2. Florian Krammer has consulted for Merck and Pfizer (before 2020), and is currently consulting for Pfizer, Seqirus, 3rd Rock Ventures and Avimex. The Krammer laboratory is also collaborating with Pfizer on animal models of SARS-CoV-2.(Serological Assay, U.S. Application Serial No. 17/913,783, NDV-HXP-S, U.S. Application Serial No. 17/922,777)..
  22. Amit K Verma

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    For correspondence
    amit.verma@einsteinmed.edu
    Competing interests
    Amit K Verma, Reviewing editor, eLife.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-5408-1673
  23. Balazs Halmos

    Department of Oncology, Albert Einstein College of Medicine, Bronx, United States
    For correspondence
    bahalmos@Montefiore.org
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-7548-8360

Funding

National Cancer Institute (3P30CA013330-49S3)

  • Balazs Halmos

NCI Community Oncology outreach program (2UG1CA189859-06)

  • Balazs Halmos

leukemia lymphoma society

  • Amit K Verma

Centers of Excellence for Influenza Research and Surveillance (HHSN272201400008C)

  • Florian Krammer

Centers of Excellence for Influenza Research and Response (75N93021C00014)

  • Florian Krammer

Collaborative Influenza Vaccine Innovation Centers (75N93019C00051)

  • Florian Krammer

National Cancer Institute (75N91019D00024)

  • Florian Krammer

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Ethics

Human subjects: Ethics statement:The study was approved by Montefiore-Einstein institutional review board (IRB# 2021-13204). Participants were recruited after referral to the study from their treating oncologists. At the consent visit, patients were provided with a study overview including initial lab draw, vaccine appointment and follow-up at pre-specified time points. The informed consent document included consent for research samples and consent to protect confidential patient information by the personnel approved under the IRB. Any person not involved with the research study did not have access to patient identifying data. De-identified data was allowed to be shared with collaborators and findings from the study be published. The informed consent document also included consent for a future research lab draw should an improved test for SARS-CoV-2 immunity became available. Finally, the consent included patient's right to withdraw from the study at any time. The patient was provided with a copy of the signed informed consent.

Copyright

© 2023, Thakkar et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 1,108
    views
  • 202
    downloads
  • 13
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Astha Thakkar
  2. Kith Pradhan
  3. Benjamin Duva
  4. Juan Manuel Carreno
  5. Srabani Sahu
  6. Victor Thiruthuvanathan
  7. Sean Campbell
  8. Sonia Gallego
  9. Tushar D Bhagat
  10. Johanna Rivera
  11. Gaurav Choudhary
  12. Raul Olea
  13. Maite Sabalza
  14. Lauren C Shapiro
  15. Matthew Lee
  16. Ryann Quinn
  17. Ioannis Mantzaris
  18. Edward Chu
  19. Britta Will
  20. Liise-anne Pirofski
  21. Florian Krammer
  22. Amit K Verma
  23. Balazs Halmos
(2023)
Study of efficacy and longevity of immune response to 3rd and 4th doses of COVID-19 vaccines in patients with cancer: a single arm clinical trial
eLife 12:e83694.
https://doi.org/10.7554/eLife.83694

Share this article

https://doi.org/10.7554/eLife.83694

Further reading

    1. Medicine
    Mitsuru Sugimoto, Tadayuki Takagi ... Hiromasa Ohira
    Research Article

    Background:

    Post-endoscopic retrograde cholangiopancreatography (ERCP) pancreatitis (PEP) is a severe and deadly adverse event following ERCP. The ideal method for predicting PEP risk before ERCP has yet to be identified. We aimed to establish a simple PEP risk score model (SuPER model: Support for PEP Reduction) that can be applied before ERCP.

    Methods:

    This multicenter study enrolled 2074 patients who underwent ERCP. Among them, 1037 patients each were randomly assigned to the development and validation cohorts. In the development cohort, the risk score model for predicting PEP was established via logistic regression analysis. In the validation cohort, the performance of the model was assessed.

    Results:

    In the development cohort, five PEP risk factors that could be identified before ERCP were extracted and assigned weights according to their respective regression coefficients: –2 points for pancreatic calcification, 1 point for female sex, and 2 points for intraductal papillary mucinous neoplasm, a native papilla of Vater, or the pancreatic duct procedures (treated as ‘planned pancreatic duct procedures’ for calculating the score before ERCP). The PEP occurrence rate was 0% among low-risk patients (≤0 points), 5.5% among moderate-risk patients (1–3 points), and 20.2% among high-risk patients (4–7 points). In the validation cohort, the C statistic of the risk score model was 0.71 (95% CI 0.64–0.78), which was considered acceptable. The PEP risk classification (low, moderate, and high) was a significant predictive factor for PEP that was independent of intraprocedural PEP risk factors (precut sphincterotomy and inadvertent pancreatic duct cannulation) (OR 4.2, 95% CI 2.8–6.3; p<0.01).

    Conclusions:

    The PEP risk score allows an estimation of the risk of PEP prior to ERCP, regardless of whether the patient has undergone pancreatic duct procedures. This simple risk model, consisting of only five items, may aid in predicting and explaining the risk of PEP before ERCP and in preventing PEP by allowing selection of the appropriate expert endoscopist and useful PEP prophylaxes.

    Funding:

    No external funding was received for this work.

    1. Medicine
    Yao Li, Hui Xin ... Wei Zhang
    Research Article

    Estrogen significantly impacts women’s health, and postmenopausal hypertension is a common issue characterized by blood pressure fluctuations. Current control strategies for this condition are limited in efficacy, necessitating further research into the underlying mechanisms. Although metabolomics has been applied to study various diseases, its use in understanding postmenopausal hypertension is scarce. Therefore, an ovariectomized rat model was used to simulate postmenopausal conditions. Estrogen levels, blood pressure, and aortic tissue metabolomics were analyzed. Animal models were divided into Sham, OVX, and OVX +E groups. Serum estrogen levels, blood pressure measurements, and aortic tissue metabolomics analyses were performed using radioimmunoassay, UHPLC-Q-TOF, and bioinformatics techniques. Based on the above research content, we successfully established a correlation between low estrogen levels and postmenopausal hypertension in rats. Notable differences in blood pressure parameters and aortic tissue metabolites were observed across the experimental groups. Specifically, metabolites that were differentially expressed, particularly L-alpha-aminobutyric acid (L-AABA), showed potential as a biomarker for postmenopausal hypertension, potentially exerting a protective function through macrophage activation and vascular remodeling. Enrichment analysis revealed alterations in sugar metabolism pathways, such as the Warburg effect and glycolysis, indicating their involvement in postmenopausal hypertension. Overall, this current research provides insights into the metabolic changes associated with postmenopausal hypertension, highlighting the role of L-AABA and sugar metabolism reprogramming in aortic tissue. The findings suggest a potential link between low estrogen levels, macrophage function, and vascular remodeling in the pathogenesis of postmenopausal hypertension. Further investigations are needed to validate these findings and explore their clinical implications for postmenopausal women.