Large-scale neural dynamics in a shared low-dimensionalstate space reflect cognitive and attentional dynamics

  1. Hayoung Song  Is a corresponding author
  2. Won Mok Shim  Is a corresponding author
  3. Monica D Rosenberg  Is a corresponding author
  1. University of Chicago, United States
  2. Sungkyunkwan University, Republic of Korea

Abstract

Cognition and attention arise from the adaptive coordination of neural systems in response to external and internal demands. The low-dimensional latent subspace that underlies large-scale neural dynamics and the relationships of these dynamics to cognitive and attentional states, however, are unknown. We conducted functional magnetic resonance imaging as human participants performed attention tasks, watched comedy sitcom episodes and an educational documentary, and rested. Whole-brain dynamics traversed a common set of latent states that spanned canonical gradients of functional brain organization, with global desynchronization among functional networks modulating state transitions. Neural state dynamics were synchronized across people during engaging movie watching and aligned to narrative event structures. Neural state dynamics reflected attention fluctuations such that different states indicated engaged attention in task and naturalistic contexts whereas a common state indicated attention lapses in both contexts. Together, these results demonstrate that traversals along large-scale gradients of human brain organization reflect cognitive and attentional dynamics.

Data availability

Raw fMRI data from the SitcOm, Nature documentary, Gradual-onset continuous performance task (SONG) dataset are available on OpenNeuro;https://openneuro.org/datasets/ds004592/versions/1.0.1. Behavioral data, processed fMRI output, and main analysis scripts are published on Github; https://github.com/hyssong/neuraldynamics

The following data sets were generated
    1. Song H
    2. Shim WM
    3. Rosenberg MD
    (2023) SONG dataset
    https://doi.org/10.18112/openneuro.ds004592.v1.0.1.
The following previously published data sets were used

Article and author information

Author details

  1. Hayoung Song

    Department of Psychology, University of Chicago, Chicago, United States
    For correspondence
    hyssong@uchicago.edu
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-5970-8076
  2. Won Mok Shim

    Department of Biomedical Engineering, Sungkyunkwan University, Suwon, Republic of Korea
    For correspondence
    wonmokshim@skku.edu
    Competing interests
    The authors declare that no competing interests exist.
  3. Monica D Rosenberg

    Department of Psychology, University of Chicago, Chicago, United States
    For correspondence
    mdrosenberg@uchicago.edu
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-6179-4025

Funding

Institute for Basic Science (R015-D1)

  • Won Mok Shim

National Research Foundation of Korea (NRF-2019M3E5D2A01060299)

  • Won Mok Shim

National Research Foundation of Korea (NRF-2019R1A2C1085566)

  • Won Mok Shim

National Science Foundation (BCS-2043740)

  • Monica D Rosenberg

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Ethics

Human subjects: Informed consent and consent to publish were obtained from the participants prior to the experiments, and the possible consequences of the study were explained. The study was approved by the Institutional Review Board of Sungkyunkwan University.

Copyright

© 2023, Song et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 4,058
    views
  • 494
    downloads
  • 26
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Hayoung Song
  2. Won Mok Shim
  3. Monica D Rosenberg
(2023)
Large-scale neural dynamics in a shared low-dimensionalstate space reflect cognitive and attentional dynamics
eLife 12:e85487.
https://doi.org/10.7554/eLife.85487

Share this article

https://doi.org/10.7554/eLife.85487

Further reading

    1. Neuroscience
    Kaspar E Vogt, Ashwinikumar Kulkarni ... Robert W Greene
    Research Article

    Sleep loss increases AMPA-synaptic strength and number in the neocortex. However, this is only part of the synaptic sleep loss response. We report an increased AMPA/NMDA EPSC ratio in frontal-cortical pyramidal neurons of layers 2–3. Silent synapses are absent, decreasing the plastic potential to convert silent NMDA to active AMPA synapses. These sleep loss changes are recovered by sleep. Sleep genes are enriched for synaptic shaping cellular components controlling glutamate synapse phenotype, overlap with autism risk genes, and are primarily observed in excitatory pyramidal neurons projecting intra-telencephalically. These genes are enriched with genes controlled by the transcription factor, MEF2c, and its repressor, HDAC4. Sleep genes can thus provide a framework within which motor learning and training occur mediated by the sleep-dependent oscillation of glutamate-synaptic phenotypes.

    1. Neuroscience
    Hans Auer, Donna Gift Cabalo ... Jessica Royer
    Research Article

    The amygdala is a subcortical region in the mesiotemporal lobe that plays a key role in emotional and sensory functions. Conventional neuroimaging experiments treat this structure as a single, uniform entity, but there is ample histological evidence for subregional heterogeneity in microstructure and function. The current study characterized subregional structure-function coupling in the human amygdala, integrating post-mortem histology and in vivo MRI at ultra-high fields. Core to our work was a novel neuroinformatics approach that leveraged multiscale texture analysis as well as non-linear dimensionality reduction techniques to identify salient dimensions of microstructural variation in a 3D post-mortem histological reconstruction of the human amygdala. We observed two axes of subregional variation in this region, describing inferior-superior as well as mediolateral trends in microstructural differentiation that in part recapitulated established atlases of amygdala subnuclei. Translating our approach to in vivo MRI data acquired at 7 Tesla, we could demonstrate the generalizability of these spatial trends across 10 healthy adults. We then cross-referenced microstructural axes with functional blood-oxygen-level dependent (BOLD) signal analysis obtained during task-free conditions, and revealed a close association of structural axes with macroscale functional network embedding, notably the temporo-limbic, default mode, and sensory-motor networks. Our novel multiscale approach consolidates descriptions of amygdala anatomy and function obtained from histological and in vivo imaging techniques.