Overexpression of BEST4 decreased proliferation of HCT 116 (A) and Caco2 (B) cells as determined by the IncuCyte confluence assay. (C) Viability of three individual BEST4-deleted clones as …
(A) Hemagglutinin (HA) protein expression in BEST4-HA-transfected GFP+ HCT116 individual clonal lines. (B) HA protein expression in BEST4-HA-transfected GFP+ Caco2 individual clonal lines. (C) BEST4 …
Original files for western blot analysis displayed in Figure 1—figure supplement 1.
PDF file containing original western blots for Figure 1—figure supplement 1, indicating the relevant bands and treatments.
(A) Expression of mRNAs encoding EMT-related genes as determined by quantitative polymerase chain reaction (qPCR) in HCT116 cells transfected with BEST4-HA or empty vector (EV). (B) As determined by …
Original files for western blot analysis displayed in Figure 2C, D, and I.
PDF file containing original western blots for Figure 2C, D, and I, indicating the relevant bands and treatments.
(A–D) Each band’s mean pixel intensities were determined and normalised to mean β-actin pixel intensity. *p<0.05, **p<0.01. Data from at least three independent experiments are presented as the mean …
(A) Endogenous BEST4 mRNA and protein levels in HES4-overexpressing HCT116 cells were detected by quantitative polymerase chain reaction (qPCR) and western blotting, respectively. (B) Endogenous BEST…
Original files for western blot analysis displayed in Figure 3A, B, and F.
PDF file containing original western blots for Figure 3A, B, and F, indicating the relevant bands and treatments.
(A) HES4 mRNA level in each colorectal cancer (CRC) cell line. (B) Western blot for BEST4 expression of Figure 3A is quantified by ImageJ, each band’s mean pixel intensities were determined and …
Original files for western blot analysis displayed in Figure 3—figure supplement 1C and E.
PDF file containing original western blots for Figure 3—figure supplement 1C and E, indicating the relevant bands and treatments.
(A) Detection of TWIST1 promoter activity in HES4-overexpressing or BEST4-overexpressing HCT116 cells through a dual-luciferase reporter assay. (B) Detection of TWIST1 promoter activity in HES4-overe…
Original files for western blot analysis displayed in Figure 4D–I.
PDF file containing original western blots for Figure 4D–I, indicating the relevant bands and treatments.
(A) BEST4 mRNA levels in HCT116 and LS174T cells transfected with BEST4-specific RNAs silencing (siRNAs) as detected by real-time polymerase chain reaction (PCR). (B) Co-immunoprecipitation of …
Original files for western blot analysis displayed in Figure 4—figure supplement 1B and C.
PDF file containing original western blots for Figure 4—figure supplement 1B and C, indicating the relevant bands and treatments.
(A–D) Each band’s mean pixel intensities were determined and normalised to mean β-actin pixel intensity. *p<0.05, **p<0.01. Data from at least three independent experiments are presented as the mean …
(A) Heatmap based on the top 100 differentially expressed genes (downregulated and upregulated) in CRCs compared with ANTs. (B) Volcano plots of RNA-seq results showing all differentially expressed …
Original files for western blot analysis displayed in Figure 5E.
PDF file containing original western blots for Figure 5E, indicating the relevant bands and treatments.
(A–C) Incubation of HCT116 cell lines expressed BEST4 or empty vector (EV) with DIDS (300 μM), a gradient increased CaCCinh-A01 and ionomycin (1 μM), respectively, overnight. The levels of chloride …
Original files for western blot analysis displayed in Figure 5—figure supplement 1D, E, and F.
PDF file containing original western blots for Figure 5—figure supplement 1D, E, and F, indicating the relevant bands and treatments.
(A) Correlation between BEST4 and CDH1 in normal and colorectal cancer (CRC) samples analysed from the The Cancer Genome Atlas (TCGA) and Genotype-Tissue Expression (GTEx) databases using the Gene …
Parameter | n | BEST4 expression | p-Value | |
---|---|---|---|---|
Low | High | |||
Age (year) | 0.66 | |||
<60 | 58 | 30 | 28 | |
≥60 | 67 | 32 | 35 | |
Sex | 0.022* | |||
Male | 74 | 43 | 31 | |
Female | 51 | 19 | 32 | |
Tumour differentiation | 0.258 | |||
Poor | 10 | 3 | 7 | |
Moderate | 114 | 59 | 55 | |
Well | 1 | 0 | 1 | |
Tumour stage (TNM)† | ||||
I | 23 | 10 | 13 | 0.02* |
II | 50 | 18 | 32 | |
III | 43 | 27 | 16 | |
IV | 9 | 7 | 2 | |
Lymph node metastasis | 0.032* | |||
N0 | 75 | 30 | 45 | |
N1 | 41 | 26 | 15 | |
N2 | 9 | 6 | 3 | |
Distant metastasis | 0.08 | |||
Absent | 116 | 55 | 61 | |
Present | 9 | 7 | 2 | |
Location | 0.114 | |||
Colon | 32 | 12 | 20 | |
Rectum | 93 | 50 | 43 | |
CEA level | 0.13 | |||
Low | 63 | 27 | 26 | |
High | 62 | 35 | 27 |
Statistically significant.
Staging was performed according to the eighth edition of AJCC (Amin, 2017).
Variable | Comparison | Univariate analysis, p (log-rank test) | Multivariateanalysis | ||
---|---|---|---|---|---|
HR | 95% CI | p | |||
Age (year) | ≥60 vs <60 | 0.001* | 2.713 | 1.524–4.810 | 0.001* |
Sex | Female vs male | 0.681 | NA | NA | NA |
Clinical stage | II, III, IV vs I | 0.1 | NA | NA | NA |
Tumour differentiation | Moderate, well vs poor | 0.08 | NA | NA | NA |
Lymph node metastasis | N1, N2 vs N0 | <0.001* | 2.190 | 1.291–3.717 | 0.004* |
Distant metastasis | Present vs absent | <0.001* | 2.185 | 1.103–4.328 | 0.025* |
Location | Rectum vs colon | 0.22 | NA | NA | NA |
CEA level | High vs low | 0.002* | 1.697 | 0.953–2.960 | 0.073 |
BEST4 level | High vs low | <0.001* | 0.285 | 0.157–0.606 | <0.001* |
Statistically significant.
HR, hazard ratio; CI, confidence interval; NA, not applicable.
Table S1.
The target sequence of short hairpin RNAs (shRNAs), RNAs silencing (siRNAs), and primers used in this study.