Comparison of gene expression patterns between insects (A) and vertebrates (B) along the anterior–posterior axis. The insect data are based on patterns found in both T. castaneum and D. melanogaster in the early neuroectoderm around the time of delamination of neuroblasts (i.e. the endpoint of neuroectoderm patterning), which is comparable to the late neural plate stage shown in B. (A) Expression in the insect neuroectoderm is based on T. castaneum and D. melanogaster data. Where the data diverge or are not available for T. castaneum, the D. melanogaster pattern is indicated by thin lines (adopted from Urbach, 2007). For each gene, we indicated at what position (vertical red broken lines) or in what region the IHB would be located (horizontal red broken lines) when using only that gene as marker. Considering all the evidence (i.e. the location of all red broken lines) the data place the IHB to an area covering the interface of ocular region and antennal segment (see red box). We find no support for the alternative hypothesis that puts the IHB to the deutocerebral/tritocerebral boundary (Hirth, 2010), that is one segment more posterior (see text for discussion). Ganglia are depicted as segmental structures (see Supplementary file 1 for arguments). The segment boundaries (bold black lines) are offset relative to the embryonic parasegmental units (broken black lines shown for the subesophageal ganglia). For simplicity of the schematic, the parasegment boundaries are not marked in the more anterior segments but they are defined by adjacent non-overlapping wg/hh expression, respectively. We propose that the classic concept of protocerebral subdivision into an anterior archicerebrum and posteriorly adjacent prosocerebrum can be re-defined by optix/six3 and otd/otx expression, respectively (green font). The more posterior trunk ganglia are similar to the subesophageal ganglia. Based on six3 and otd expression, we assign the neuroendocrine pars intercerebralis and pars lateralis (PI/PL) to the archicerebrum and the eyes to the prosocerebrum. The mushroom bodies (MB) are likely part of the prosocerebrum while we tentatively assign the central complex (Cx), the ocelli and the insect head placode (plac) to a mixed origin. The data are combined from single and double stainings of different sources (Beermann and Schröder, 2008; Posnien et al., 2011b; Schinko et al., 2008; Steinmetz et al., 2011; Urbach, 2007; Wheeler et al., 2005) such that not all data (e.g. of FGF8, vnd, and msh) are based on a precise mapping at the same stage. Hence, the locations of some expression boundaries are approximations. See Supplementary file 1 for more details on the reasons for the mapping. Expression of genes involved in MHB formation and function in vertebrates (redrawn from Urbach, 2007). Given the difference of the gene regulatory networks subdividing insect segments and vertebrate rhombomeres, respectively, we hesitate to claim homology of antennal segment with rhombomere 1 despite the fact that both are devoid of otd and Hox gene expression (see text for discussion on the tripartite brain). More generally, we do not homologize segments and rhombomers.