Meteorological Drivers of Influenza A and B Positivity in a Subtropical Chinese City: A Six-Year Surveillance Study Integrating Distributed Lag Non-Linear Models and Deep Learning

  1. Translational & Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom
  2. Department of Microbiology Laboratory, Putian Centre for Disease Control and Prevention, Putian, China
  3. Research Institute, DAAN Gene Co, Ltd, Guangzhou, China
  4. The Medicine and Biological Engineering Technology Research Centre of the Ministry of Health, Guangzhou, China
  5. College of Biological Science and Engineering, Fuzhou University, Fuzhou, China
  6. Department of Infection, Mengchao Hepatobiliary Hospital of Fujian Medical University, Fuzhou, China
  7. College of Life Science and Technology, Jinan University, Guangzhou, China
  8. School of Life Sciences and Biopharmaceutics, Guangdong Pharmaceutical University, Guangzhou, China

Peer review process

Revised: This Reviewed Preprint has been revised by the authors in response to the previous round of peer review; the eLife assessment and the public reviews have been updated where necessary by the editors and peer reviewers.

Read more about eLife’s peer review process.

Editors

  • Reviewing Editor
    George Okoli
    University of Hong Kong, Hong Kong, Hong Kong
  • Senior Editor
    Joshua Schiffer
    Fred Hutch Cancer Center, Seattle, United States of America

Reviewer #2 (Public review):

[Editors' note: The Reviewing Editor has assessed the revised article without further input from the original reviewers. The Reviewing Editor noted the authors further addressed a methodological concern, and eLife's Assessment remains unchanged from the previous review.]

Summary:

The study aimed to assess the associations between meteorological drivers and influenza is important although not new. The authors used 6 years of surveillance data and deep learning models, combining distributed lag non-linear models (DLNM) with Bayesian-optimized LSTM neural networks for predictive modeling. The key interest in this area is to explore the subtropical locations, where influenza is less common and circulates year-round. The authors further claimed that such an association could be able to provide an early warning in the community.

Strengths:

Study design based on a prospective cohort to analyse the data for retrospective outcomes.

Author response:

The following is the authors’ response to the previous reviews.

Public Reviews:

Reviewer #2 (Public review):

Summary:

The study aimed to assess the associations between meteorological drivers and influenza is important although not new. The authors used 6 years of surveillance data and deep learning models, combining distributed lag non-linear models (DLNM) with Bayesian-optimized LSTM neural networks for predictive modeling. The key interest in this area is to explore the subtropical locations, where influenza is less common and circulates year-round. The authors further claimed that such an association could be able to provide an early warning in the community.

Strengths:

Study design based on a prospective cohort to analyse the data for retrospective outcomes.

We would like to express our sincere and heartfelt gratitude to all of you for your exceptionally thorough, constructive, and intellectually rigorous evaluation of our manuscript. The breadth and depth of the feedback we have received reflect a high standard of scientific scrutiny that we deeply respect and appreciate.

  1. Howard Hughes Medical Institute
  2. Wellcome Trust
  3. Max-Planck-Gesellschaft
  4. Knut and Alice Wallenberg Foundation