PURA Syndrome-causing mutations impair PUR-domain integrity and affect P-body association

  1. Institute of Structural Biology, Helmholtz Munich – German Research Center for Environmental Health, 85764 Neuherberg, Germany
  2. Institute of Pharmaceutical Biotechnology, Ulm University, 89081 Ulm, Germany
  3. Chemistry Department, Biomolecular NMR and Center for Integrated Protein Science Munich, Technical University of Munich, 85748 Garching, Germany
  4. Biocenter, Institute of Molecular Physiology, Johannes Gutenberg-Universität (JGU), 55128 Mainz, Germany
  5. Acellera Labs SL, 08005 Barcelona, Spain
  6. Institute of Molecular Biology (IMB), 55128 Mainz, Germany

Peer review process

Not revised: This Reviewed Preprint includes the authors’ original preprint (without revision), an eLife assessment, and public reviews.

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Editors

  • Reviewing Editor
    Nils Brose
    Max Planck Institute of Experimental Medicine, Göttingen, Germany
  • Senior Editor
    Volker Dötsch
    Goethe University Frankfurt, Frankfurt am Main, Germany

Joint Public Review

The present study focuses on the structure and function of human PURA, a regulator of gene transcription and mRNA transport and translation whose mutation causes the neurodevelopmental PURA syndrome, characterized by developmental delay, intellectual disability, hypotonia, epileptic seizures, a.o. deficits. The authors combined structural biology, molecular dynamics simulation, and various cell biological assays to study the effects of disease-causing PURA mutations on protein structure and function. The corresponding data reveal a highly dynamic PURA structure and show that disease-related mutations in PURA cause complex defects in folding, DNA-unwinding activity, RNA binding, dimerization, and partitioning into processing bodies. These findings provide first insights into how very diverse PURA mutations can cause penetrant molecular, cellular, and clinical defects. This will be of substantial interest to cell biologists, neurogeneticists, and neurologists alike.

A particular strength of the present study is the structural characterization of human PURA, which is a challenging target for structural biology approaches. The molecular dynamics simulations are state-of-the-art, allowing a statistically meaningful assessment of the differences between wild-type and mutant proteins. The functional consequences of PURA mutations at the cellular level are fascinating, particularly the differential compartmentalization of wild-type and mutant PURA variants into certain subcellular condensates.

Weaknesses that warrant rectification relate to (i) the interpretation of statistically non-significant effects seen in the molecular dynamics simulations, (ii) the statistical analysis of the differential compartmentalization of PURA variants into processing bodies vs. stress granules, and (iii) the documentation of protein expression levels and knock-down efficiencies.

  1. Howard Hughes Medical Institute
  2. Wellcome Trust
  3. Max-Planck-Gesellschaft
  4. Knut and Alice Wallenberg Foundation