miR-142 orchestrates a network of actin cytoskeleton regulators during megakaryopoiesis

  1. Elik Chapnik
  2. Natalia Rivkin
  3. Alexander Mildner
  4. Gilad Beck
  5. Ronit Pasvolsky
  6. Eyal Metzl-Raz
  7. Yehudit Birger
  8. Gail Amir
  9. Itay Tirosh
  10. Ziv Porat
  11. Liron L Israel
  12. Emmanuel Lellouche
  13. Shulamit Michaeli
  14. Jean-Paul M Lellouche
  15. Shai Izraeli
  16. Steffen Jung
  17. Eran Hornstein  Is a corresponding author
  1. Weizmann Institute of Science, Israel
  2. Cancer Research Center, Sheba Medical Center, Israel
  3. Hadassah Medical Center, Israel
  4. Institute of Nanotechnology and Advanced Materials, Bar-Ilan University, Israel
  5. Bar-Ilan University, Israel
  6. Tel Aviv University, Israel
6 figures and 1 additional file

Figures

Figure 1 with 1 supplement
Pronounced thrombocytopenia in miR-142−/− mice.

(A) Left panel: schematic representation of the gene trap cassette targeting the murine miR-142 locus. The WT and mutant loci are shown with the gene trap-targeting vector. pre-miR-142 is shown as a …

https://doi.org/10.7554/eLife.01964.003
Figure 1—source data 1

Mendelian distribution of miR-142 intercrosses.

Genotypes of E14.5 and P21 offspring from miR-142+/− intercrosses reveals partial perinatal or juvenile lethality in miR-142−/− mice. The actual and expected number of mice for each genotype at the indicated stages is shown.

https://doi.org/10.7554/eLife.01964.004
Figure 1—figure supplement 1
miR-142 hematopoietic-intrinsic expression is required for thrombopoiesis.

Schematic diagram of the experimental design for re-introduction of miR-142−/− BM into lethally irradiated WT mouse recipient (left panel), which results in reduced platelet counts relative to …

https://doi.org/10.7554/eLife.01964.005
Figure 2 with 2 supplements
Perturbed myeloerythroid development in the absence of miR-142.

(A) Diagram of gating strategy used to define the myeloerythroid progenitor populations (top panel), and representative FACS profiles of mutant miR-142−/− and WT BM cells (bottom panels). (B) Flow …

https://doi.org/10.7554/eLife.01964.006
Figure 2—figure supplement 1
Gene expression in miR-142−/− MKs.

(A and B) qPCR expression analyses confirm nullification of miR-142-3p and miR-142-5p (A) and similar Bzrap1 expression (B) in miR-142−/− MKs, relative to WT controls. Representative results from …

https://doi.org/10.7554/eLife.01964.007
Figure 2—figure supplement 2
Splenomegaly and increased numbers of splenic MKs in miR-142−/− mice.

(A) Representative spleen sections were stained with hematoxylin and eosin (H&E, top panel) and anti-von Willebrand Factor (anti vWF; bottom panel). Arrows indicate MKs. Scale bars, 100 μm. (B) A …

https://doi.org/10.7554/eLife.01964.008
Figure 3 with 1 supplement
Impaired maturation of miR-142−/− MKs.

(A) Representative BM sections of miR-142−/− vs WT controls, stained with anti-von Willebrand Factor (anti vWF). In the bottom right corner of each section there is an enlarged image of a …

https://doi.org/10.7554/eLife.01964.009
Figure 3—figure supplement 1
miR-142-3p expression in differentiated MKs following transfection of dsRNA mimetics. qPCR expression analyses confirm overexpression of miR-142-3p in WT and miR-142−/− FL-derived MKs transfected with miR-142-3p mimic, relative to MKs transfected with control mimics.

**p<0.005.

https://doi.org/10.7554/eLife.01964.010
Disturbed actin cytoskeletal architecture and dynamics in the absence of miR-142.

(A) Representative micrographs of WT and miR-142−/− FL-derived MKs, cultured for 5 days with TPO and subsequently plated on fibronectin-coated cover-slips for 3 hr. F-actin (phalloidin, red), …

https://doi.org/10.7554/eLife.01964.011
Figure 5 with 4 supplements
miR-142 Regulates a group of cytoskeletal regulatory genes during megakaryopoiesis.

(A) A log2-scale scatter plot, presenting the expression of mRNAs from FL-derived WT MKs (x axis), and miR-142−/− MKs (y axis). The inset table depicts the number of genes that are significantly up- …

https://doi.org/10.7554/eLife.01964.012
Figure 5—source data 1

GO analysis for differentially regulated genes (>twofold) in miR-142−/− MKs.

https://doi.org/10.7554/eLife.01964.013
Figure 5—source data 2

Genes commonly up-regulated (>1.5-fold) in miR-142−/− MKs and DCs (CD24+ and CD24).

TargetScan predicted targets of miR-142-3p miR-142-5p are indicated.

https://doi.org/10.7554/eLife.01964.014
Figure 5—figure supplement 1
Expression distribution plot of miR-142 putative targets.

miR-142-3p TargetScan-predicted targets (blue right panel) are over-represented among genes upregulated in miR-142−/− FL-derived MKs (p<10E−16). miR-142-5p TargetScan-predicted targets (blue, left …

https://doi.org/10.7554/eLife.01964.015
Figure 5—figure supplement 2
qPCR expression analysis of miR-142 putative targets in precursor cell populations.

qPCR expression analysis of Wasl and Cfl2 in PreMegE (left panel) and MkP (right panel) precursor cell populations sorted from miR-142−/− and WT BMs. *p<0.05; ***p<0.0005.

https://doi.org/10.7554/eLife.01964.016
Figure 5—figure supplement 3
miR-142-3p directly regulates cytoskeletal genes.

Schematic representations of 3′UTRs of cytoskeletal genes (A) Cfl2, (B) Wasl, (C) Bod1, Twf1, (E) Itgav, (F) Grfl1 with miR-142-3p binding sites and the corresponding mutations made to test direct …

https://doi.org/10.7554/eLife.01964.017
Figure 5—figure supplement 4
miR-142-3p directly regulates cytoskeletal genes.

Relative luciferase activity of reporters that harbor the 3′UTR of novel miR-142-3p targets: Bod1 (A), Twf1 (B), and Itgav (C). Luciferase reporter activity is repressed by introduction of miR-142 …

https://doi.org/10.7554/eLife.01964.018
Figure 6 with 2 supplements
miR-142-3p targets a battery of actin cytoskeleton regulators to facilitate proplatelet formation.

(A) Representative micrographs of WT and miR-142−/− (KO) FL-derived MKs, transduced with the indicated shRNA vectors and cultured for 48 hr with TPO. White arrows denote MKs extending proplatelets. …

https://doi.org/10.7554/eLife.01964.019
Figure 6—figure supplement 1
Knockdown validation of miR-142-3p targets.

qPCR expression analysis of Cfl2, Wasl, and Grlf1 genes in NIH-3T3 fibroblasts that were transduced with either lentivrial vectors encoding shRNAs directed against miR-142-3p targets (shCfl2, …

https://doi.org/10.7554/eLife.01964.020
Figure 6—figure supplement 2
Knockdown of miR-142-3p targets in WT MKs has no effect on proplatelet formation.

WT MKs transduced with shRNAs targeting miR-142-3p targets exhibited PPF levels slightly higher than WT MKs that were transduced with a control shRNA-targeting RFP. Representative results from one …

https://doi.org/10.7554/eLife.01964.021

Additional files

Supplementary file 1

Sequences of primers used in this study.

https://doi.org/10.7554/eLife.01964.022

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