Quantitative determinants of aerobic glycolysis identify flux through the enzyme GAPDH as a limiting step
- Cornell University, United States
- Harvard Medical School, United States
- Johns Hopkins University School of Medicine, United States
- University of California, Davis, United States
Abstract
Aerobic glycolysis or the Warburg Effect (WE) is characterized by the increased metabolism of glucose to lactate. It remains unknown what quantitative changes to the activity of metabolism are necessary and sufficient for this phenotype. We developed a computational model of glycolysis and an integrated analysis using metabolic control analysis (MCA), metabolomics data, and statistical simulations. We identified and confirmed a novel mode of regulation specific to aerobic glycolysis where flux through GAPDH, the enzyme separating lower and upper glycolysis, is the rate-limiting step in the pathway and the levels of fructose (1,6) bisphosphate (FBP), are predictive of the rate and control points in glycolysis. Strikingly, negative flux control was found and confirmed for several steps thought to be rate-limiting in glycolysis. Together these findings enumerate the biochemical determinants of the WE, and suggest strategies for identifying the contexts in which agents that target glycolysis might be most effective.
Article and author information
Author details
Copyright
© 2014, Shestov et al.
This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.
Metrics
-
- 7,804
- views
-
- 1,204
- downloads
-
- 238
- citations
Views, downloads and citations are aggregated across all versions of this paper published by eLife.
Citations by DOI
-
- 238
- citations for umbrella DOI https://doi.org/10.7554/eLife.03342
Download links
A two-part list of links to download the article, or parts of the article, in various formats.
Downloads (link to download the article as PDF)
Open citations (links to open the citations from this article in various online reference manager services)
Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)
Quantitative determinants of aerobic glycolysis identify flux through the enzyme GAPDH as a limiting step
eLife 3:e03342.
https://doi.org/10.7554/eLife.03342
