Strain, strain background (Escherichia coli) | MG1655 | LCB Collection | N/A | |
Strain, strain background (Escherichia coli) | BE152 | This study | N/A | ΔmsrA ΔmsrB |
Strain, strain background (Escherichia coli) | CH011 | This study | N/A | ΔmsrA::FRT ΔmsrB::FRT |
Strain, strain background (Escherichia coli) | CH074 | This study | N/A | ΔrecA::kan |
Strain, strain background (Escherichia coli) | LL401 | Loiseau et al., 2007 | N/A | arap::erpA |
Strain, strain background (Escherichia coli) | LL1594 | This study | N/A | ΔrecA::spc |
Strain, strain background (Escherichia coli) | BE007 | Ezraty et al., 2014 | N/A | Hpx- = ΔkatE ΔkatG ahpC::kan |
Strain, strain background (Escherichia coli) | BE080 | This study | N/A | BE007 ΔmsrA ΔmsrB |
Strain, strain background (Escherichia coli) | LL1609 | This study | N/A | BE007 ΔrecA::spec |
Strain, strain background (Escherichia coli) | BE032 | This study | N/A | BE007 ΔuvrA |
Strain, strain background (Escherichia coli) | BE033 | This study | N/A | BE007 ΔuvrA ΔmsrA ΔmsrB
|
Strain, strain background (Escherichia coli) | sfiA::lacZ | Grompone et al., 2004 | N/A | ΔlacZ::cat sfiA::Mud lacZ cat-bla |
Strain, strain background (Escherichia coli) | CH039 | This study | N/A | CH011 ΔlacZ::cat sfiA::Mud lacZ cat-bla |
Strain, strain background (Escherichia coli) | LL1713 | This study | N/A | recA::gfp-cat |
Strain, strain background (Escherichia coli) | EAW831 | This study | N/A | sfiA ::FRT recAM164Q |
Strain, strain background (Escherichia coli) | EAW287 | Robinson et al., 2015 | N/A | sfiA ::FRT recAE38K::kan (recA730) |
Strain, strain background (Escherichia coli) | LL1601 | This study | N/A | MG1655 ΔlacZ::cat sfiA::Mud lacZ cat-bla ΔrecA::spc |
Strain, strain background (Escherichia coli) | LL1862 | This study | N/A | MG1655 ΔlacZ::cat sfiA::Mud lacZ cat-bla recAE38K::kan (recA730) |
Strain, strain background (Escherichia coli) | LL1863 | This study | N/A | MG1655 ΔlacZ::cat sfiA::Mud lacZ cat-bla + recAM164Q |
Strain, strain background (Escherichia coli) | LL1976 | This study | N/A | MG1655 recAM164L ∆araBAD::kan |
Strain, strain background (Escherichia coli) | LL1781 | This study | N/A | MG1655 recAM164L |
Strain, strain background (Escherichia coli) | LL1974 | This study | N/A | MG1655 ∆araBAD::kan |
Strain, strain background (Escherichia coli) | BW25113 | LCB Collection | N/A | F-, ∆(araD-araB)567, lacZ4787(del)::rrnB-3, LAM-, rph-1, ∆(rhaD-rhaB)568, hsdR514 |
Strain, strain background (Escherichia coli) | STL2669 | A gift from S Lovett | N/A | (ΔrecA-srlR)306::Tn10 TetRxonA2 (exoI-) |
Strain, strain background (Escherichia coli) | DH5α | LCB Collection | N/A | F– endA1 glnV44 thi-1 recA1 relA1 gyrA96 deoR nupG purB20 φ80dlacZΔM15 Δ(lacZYA-argF)U169, hsdR17(rK–mK+), λ– |
Plasmids | pGEMT-easy | Promega | A1360 | ‘High’ copy vector, cloning site into lacZ ApR |
Plasmids | pUC18 | LCB Collection | N/A | High copy vector with the small size MCS inverted as pUC19 ApR |
Plasmids | pMsrA | LCB Collection | N/A | pUC18 - msrA+ |
Plasmids | pMsrB | LCB Collection | N/A | pUC18 - msrB+ |
Plasmids | pRecA | A gift from M. Modesti | N/A | pUC18 - recA+ |
Plasmids | pBBR | LCB Collection | N/A | ‘Medium-low’ copy vector pBBR-MCS2 + cat HindIII CmR KanR |
Plasmids | pBBR-RecA | This study | N/A | pBBR - recA SacII/SpeI |
Plasmids | pBBR-RecAM35L | This study | N/A | pBBR - recAM35L SacII/SpeI |
Plasmids | pBBR-RecAM164L | This study | N/A | pBBR - recAM164L SacII/SpeI |
Plasmids | pBBR-RecAM35Q | This study | N/A | pBBR - recAM35Q SacII/SpeI |
Plasmids | pBBR-RecAM164Q | This study | N/A | pBBR - recAM164Q EcoRI |
Plasmids | pEAW1078 | This study | N/A | Derived from pEAW260 - recAM35L ApR |
Plasmids | pCJH0002 | This study | N/A | Derived from pEAW260 - recAM164Q ApR |
Plasmids | pT7pol26 | Cox Lab Collection | N/A | Carries the T7 RNA polymerase under the control of a lac promoter |
Sequenced-based reagent | recA for | This study | PCR primers | CGGTGCGTCGTCAGGCTACTGCGT |
Sequenced-based reagent | recA rev | This study | PCR primers | GCCAGAATGCGTACCGCACGAT |
Sequenced-based reagent | M35L for | This study | PCR primers | GACCGTTCCCTGGATGTGGAAACCATCTCTACCGGTT CGCTTTCACTGGATATCGCGCTT |
Sequenced-based reagent | M35L rev | This study | PCR primers | GGTTTCCACATCCAGGGAACGGTCTTCA CCCAGGCGCATG |
Sequenced-based reagent | M35Q for | This study | PCR primers | GACCGTTCCCAGGATGTGGAAACCATCTCTACCGG TTCGCTTTCACTGGATATCGCG |
Sequenced-based reagent | M35Q rev | This study | PCR primers | TTCCACATCCTGGGAACGGTCTTCACCCAGGCGCAT GATGGAGCC |
Sequenced-based reagent | M164L for | This study | PCR primers | GGCGACTCTCACCTGGGCCTTGCGGCACGTATGATGAGCCAGGCG |
Sequenced-based reagent | M164L rev | This study | PCR primers | TGCCGCAAGGCCCAGGTGAGAGTCGCCGATTTCGCCTTCGATTTC |
Sequenced-based reagent | M164Q for | This study | PCR primers | GGCGACTCTCACCAGGGCCTTGCGGCACGTATGATGAGCCAGGCG |
Sequenced-based reagent | M164Q rev | This study | PCR primers | TGCCGCAAGGCCCTGGTGAGAGTCGCCGATTTCGCCTTCGATTTC |
Sequenced-based reagent | T7 pro | This study | PCR primers | TAATACGACTCACTATAGGG |
Sequenced-based reagent | recA*-M35L-rev | This study | PCR primers | GTAGAGATGGTTT CCACATCCAGGGAA CGGTCTTC |
Sequenced-based reagent | recA*-M164Q-rev | This study | PCR primers | TGCCGCAAGGCCCT GGTGAGAGTCGCCG |
Sequenced-based reagent | 5for recA M165L SceI K7kan | This study | PCR primers | GGCGACTCTCACCTGGG CCTTGCG GCACGTATGATGAGCCAGGC GTGTAGGCTGGAGCTGCTTC |
Sequenced-based reagent | 3rev recA K7Kan | This study | PCR primers | AATTTTCATACGGATCTGGTTGAT GAAGATCAGCAGCGTCCT ATTACCCTGTTATCCCTACC TTAGTTCCTATTCCGAAGTTC |
Sequenced-based reagent | 5-recA-GFP | This study | PCR primers | GATGATAGCGAAGGCGTAGCAGAAACTAACGAAGA TTTTTAATAAGAAGGAGATATACATATGAG |
Sequenced-based reagent | 3-recA-K7Cat | This study | PCR primers | AGGGCCGCAGATGCGACCCTTGTGTATCAAACAAGA CGATTATCACTTATTCAGGCGTA |
Sequenced-based reagent | 5-K7wanner-spc | This study | PCR primers | TGTGTAGGCTGGAGCTGCTTCGAAGTTCCTATACTT TCTAGCAGGAGGAATTCACCATGAGTGAAAAAGTGCCCGCC |
Sequenced-based reagent | 3-K7wanner-spc | This study | PCR primers | CATATGAATATCCTCCTTAGTTCCTATTCCGAAGT TCCTATTCTCTAGAAAG TATCATTGGCTGGCA CCAAGCAGTTTA |
Sequenced-based reagent | 5-wanner-recA | This study | PCR primers | ATTGACTATCCGGTATTACCCGGCATGACAGGAGTAAAAGTGTAGGCTGGAGCTGCTTC |
Sequenced-based reagent | 3-wanner-recA | This study | PCR primers | AGGGCCGCAGATGCGACCCTTGTGTATCAAACAAGACGACATATGAATATCCTCCTTA |
Antibody | Anti-RecA (Rabbit polyclonal) | Abcam | 63797 | WB (1∶20,000) |
Antibody | Anti-LexA (Rabbit polyclonal) | P. Moreau (LCB) | | WB (1∶5,000) |
Antibody | Goat anti-rabbit IgG-Alk Phos (polyclonal) | Chemicon International | AP132A | WB (1 :10,000) |
Antibody | Goat anti-rabbit HRP (polyclonal) | Promega | W4018 | WB (1 :10,000) |
Commercial assay or kit | ECL western blotting kit | Thermo Scientific | 32106 | |
Commercial assay or kit | Gel purified using kit | Promega | A9282 | |
Commercial assay or kit | Protein assay kit | Bio-Rad | 23236 | |
Software, algorithm | QI-Macros software | | KnowWare International, Inc, CO | |
Chemical compound, drug | ProteaseMAX | Promega | V2071 | |
Chemical compound, drug | Trypsin Gold | Promega | V5280 | |
Chemical compound, drug | Sodium hypochlorite | Acros Organics | AC219255000 | |
Chemical compound, drug | Phusion enzyme | Thermo Scientific | F531S | |
Chemical compound, drug | LB (Lysogeny Broth) | Difco | 244620 | |
Other | Vinyl Anaerobic Chambers | Coy | Coy Laboratory Products Inc, USA | coylab.com |
Other | Typhoon FLA-9000 | GE Healthcare | FLA9000 | |
Other | | Thermo Scientific | F531S | |