RAW macrophages transfected with mEmerald-Lifeact were fed soft deformable acrylamide-co-acrylic acid micro (DAAM)-particles (9 μm,1.4 kPa) functionalized with IgG and AF647-Cadaverineand imaged …
Numeric data for Figure 1—figure supplement 1a–c,e,f and Figure 1—figure supplement 2c–f.
(a,b,c) Violin plot shows individual phagocytic events (colored markers, n = 23), mean (black cross), and median (dashed line). (a) Engulfment time for individual phagocytic events. (b) Maximum …
(a) Time lapse montage (min:s) of RAW macrophage transfected with mEmerald-Lifeact internalizing a deformable acrylamide-co-acrylic acid-microparticle (DAAMP) (9 μm, Young’s modulus 6.5 kPa) …
(a) Time lapse montage (min:s) of a BMDM transfected with mEmerald-Lifeact internalizing a soft deformable acrylamide-co-acrylic acid-microparticle (DAAMP) (9 μm, Young’s modulus 0.3 kPa) …
(a) Confocal images of fixed RAW macrophages phagocytosing soft deformable acrylamide-co-acrylic acid micro (DAAM)-particles functionalized with IgG, and AF488-Cadaverine for visualization. Cells …
Numeric data for Figure 2d,f–i.
(a) Determination of contact area between cell and target was calculated using both I/O signal (immunostain of exposed particle surface) and the F-actin signal for confocal microscopy data. First, …
(a) Confocal images of drug-treated fixed RAW cells phagocytosing deformable acrylamide-co-acrylic acid micro (DAAM)-particles functionalized with IgG and AF488-Cadaverine for visualization. Cells …
Numeric data for Figure 3d–j and Figure 3—figure supplement 1a–e.
(a) Determination of F-actin and contractile ring localization, peak magnitude, and peak width. Particles were aligned with the centroid of the cell-target contact area (base of the cup) at the …
Visualization of deformations, F-actin intensity, and I/O stain for all 63 particles being phagocytosed by CK666-treated cells used in this manuscript shown using Mollweide projections. Particles …
Visualization of deformations, F-actin intensity, and I/O stain for all 75 particles being phagocytosed by Blebbistatin-treated cells used in this manuscript shown using Mollweide projections. …
Visualization of deformations, F-actin intensity, and I/O stain for all 55 particles being phagocytosed by SMIFH2-treated cells used in this manuscript shown using Mollweide projections. Particles …
(a) Confocal images of representative SMIFH2-treated fixed RAW cell phagocytosing deformable acrylamide-co-acrylic acid-micro (DAAM)-particle functionalized with IgG and AF488-Cadaverine for …
(a,b) RAW macrophages were fed 1.4 kPa deformable acrylamide-co-acrylic acid-microparticles (DAAMPs) and stained for F-actin. Images represent maximum intensity projections of confocal z-stacks. …
Numeric data for Figure 4d–j, Figure 4—figure supplement 1d–g and Figure 4—figure supplement 2c.
(a) Example of teeth identification method. Teeth were defined as areas of high-actin intensity and inward protrusion. For the mean curvature, the average value of mean curvature for edge …
(a) Parametrization of the model. Ten rigid teeth indent a target around the equator of the particle, with Rteeth the tooth radius, Rtarget the target radius (3.7 μm), d the absolute indentation …
(a) RAW macrophages were transfected with fluorescently tagged actin-binding proteins and challenged to ingest deformable acrylamide-co-acrylic acid-microparticles (DAAMPs) (11 μm, 1.4 kPa) …
RAW macrophages were transfected with fluorescently tagged actin binding proteins and challenged to ingest deformable acrylamide-co-acrylic acid-micro (DAAM)-particles (11 μm, 1.4 kPa) …
(a) Maximum intensity projections (MIP) of lattice light-sheet microscopy (LLSM) stacks showing failed internalization attempt of RAW macrophage with IgG-functionalized 1.4 kPa deformable …
Numeric data for Figure 6d–f and Figure 6—figure supplement 1b.
(a) Top, maximum intensity projections (MIP) of lattice light-sheet microscopy (LLSM) time lapse (min:s) showing successful internalization attempt of RAW macrophage with IgG-functionalized 1.4 kPa …
(a) Graphical model: Arp2/3-mediated actin teeth, guided by myosin-I motors, and organized in a ring drive phagocytic progression and inward target deformation. Teeth are potentially interconnected …
RAW macrophages transfected with mEmerald-Lifeact (gray) were fed DAAM-particles (9 μm,1.4 kPa) (blue) functionalized with AF647-Cadaverine, BSA, and anti-BSA IgG. Maximum intensity projections in …
Maximum intensity projection of RAW macrophage transfected with mEmerald-Lifeact (gray) ingesting DAAM-particles (9 μm, 6.5 kPa) (blue) functionalized with AF647-Cadaverine, BSA, and anti-BSA IgG. …
Maximum intensity projection of RAW macrophage transfected with mEmerald-Lifeact (gray) ingesting DAAM-particles (9 μm, 6.5 kPa) (blue) functionalized with AF647-Cadaverine, BSA, and anti-BSA IgG. …
Maximum intensity projections of RAW macrophages transfected with mEmerald-Lifeact (gray) challenged with DAAM-particles (9 μm,1.4 kPa) (blue). Merged images (left) with single DAAMP channel in gray …
Murine BMDMs transfected with mEmerald-Lifeact (gray) were fed DAAM-particles (11 μm,1.4 kPa) (blue) functionalized with TRITC-Cadaverine, BSA, and anti-BSA IgG. Merged maximum intensity projections …
Maximum intensity projections of RAW macrophages transfected with EGFP-NMMIIA (non-muscle myosin-IIa) (gray) challenged with deformable acrylamide-co-acrylic acid-micro (DAAM)-particles (9 μm,1.4 …
Lattice light-sheet microscopy (LLSM) maximum intensity projections of RAW macrophage expressing mEmerald-Lifeact (gray) challenged with deformable acrylamide-co-acrylic acid-micro (DAAM)-particles …
Lattice light-sheet microscopy (LLSM) maximum intensity projections of RAW macrophage expressing mEmerald-Lifeact (gray) ingesting deformable acrylamide-co-acrylic acid-micro (DAAM)-particles …
Reagent type (species) or resource | Designation | Source or reference | Identifiers | Additional information |
---|---|---|---|---|
Cell line (Mus musculus) | RAW264.7 | ATCC | TIB-71RRID:CVCL_0493 | Macrophage-like cell line |
Cell line (Homo sapiens) | HL-60 | ATCC | CCL-240RRID:CVCL_0002 | Differentiated into neutrophil-like cells |
Biological sample (mouse) | Primary bone marrow cells | Barger et al., 2019 | ||
Antibody | Goat polyclonal anti-rabbit-Alexa Fluor-405 | Invitrogen | A31556RRID:AB_221605 | (1:400) |
Antibody | Rabbit polyclonal anti-mouse BSA | MP Bio | 0865111RRID: AB_2335061 | (3 mg/mL) |
Recombinant DNA reagent | EGFP-myo1e (plasmid) | Krendel et al., 2007 | Plasmid construct to transfect and examine myo1e localization | |
Recombinant DNA reagent | EGFP-myo1f (plasmid) | Barger et al., 2019 | Plasmid construct to transfect and examine myo1f localization | |
Recombinant DNA reagent | mEmerald-Lifeact (plasmid) | Addgene (a gift from Michael Davidson) | #54148 | Plasmid construct to transfect and monitor F-actin dynamics |
Recombinant DNA reagent | EGFP-RLC (plasmid) | Plasmid construct to transfect and examine myosin-II localization | ||
Recombinant DNA reagent | pUB-Halo-WASP (plasmid) | This paper | Plasmid construct to transfect and examine WASP localization | |
Recombinant DNA reagent | CMV-GFP-NMHCII-A (plasmid) | Addgene | #11347 | Plasmid construct to transfect and examine myosin-II localization |
Recombinant DNA reagent | EGFP-ARP3 (plasmid) | This paper | Plasmid construct to transfect and examine Arp2/3 complex localization | |
Recombinant DNA reagent | mEmerald-cortactin (plasmid) | This paper | Plasmid construct to transfect and examine cortactin localization | |
Recombinant DNA reagent | Cofilin-EGFP(plasmid) | Addgene | #50859 | Plasmid construct to transfect and examine cofilin localization |
Recombinant DNA reagent | mScarlet-i-paxillin(plasmid) | This paper | Plasmid construct to transfect and examine paxillin localization | |
Recombinant DNA reagent | pUB-mEmerald-vinculin(plasmid) | This paper | Plasmid construct to transfect and examine vinculin localization | |
Peptide, recombinant protein | BSA | Sigma | A3059 | 20 mg/mL |
Peptide, recombinant protein | Alexa Fluor-488 conjugated phalloidin | Life Technologies | A12379 | 1:300 |
Peptide, recombinant protein | Alexa Fluor-568 conjugated phalloidin | Life Technologies | A12380 | 1:300 |
Peptide, recombinant protein | Alexa Fluor-488 Cadaverine | Thermo Fisher Scientific | A30679 | 0.2 mM final concentration |
Peptide, recombinant protein | Alexa Fluor-647 Cadaverine | Thermo Fisher Scientific | A30676 | 0.2 mM final concentration |
Commercial assay or kit | Neon Transfection System 100 µL Kit | Thermo Fisher Scientific | MPK10096 | |
Chemical compound, drug | CK666 | EMD Millipore | SML0006 | 150 μM |
Chemical compound, drug | SMIFH2 | EMD Millipore | S4826 | 10 μM |
Chemical compound, drug | Blebbistatin | EMD Millipore | B0560 | 15 μM |
Chemical compound, drug | DAAM-particles | Vorselen et al., 2020b | Can be obtained by contacting Julie A Theriot | |
Software, algorithm | Fiji (ImageJ) | NIH | RRID:SCR_002285 | |
Software, algorithm | Imaris | Bitplane | RRID:SCR_007370 | |
Software, algorithm | MATLAB | Mathworks | RRID:SCR_001622 | |
Software, algorithm | Python | Python Software foundation | RRID:SCR_008394 | |
Software, algorithm | Custom MATLAB code | Other | https://gitlab.com/dvorselen/DAAMparticle_Shape_Analysis | |
Software, algorithm | Custom Python code | Other | https://gitlab.com/micronano_public/ShElastic | |
Other | VECTASHIELD Antifade Mounting Medium | Vector Laboratories | H-1000 |