pH-dependent 11° F1FO ATP synthase sub-steps reveal insight into the FO torque generating mechanism

  1. Seiga Yanagisawa
  2. Wayne D Frasch  Is a corresponding author
  1. Arizona State University, United States

Abstract

Most cellular ATP is made by rotary F1FO ATP synthases using proton translocation-generated clockwise torque on the FO c-ring rotor, while F1-ATP hydrolysis can force counterclockwise rotation and proton pumping. The FO torque-generating mechanism remains elusive even though the FO interface of stator subunit-a, which contains the transmembrane proton half-channels, and the c-ring is known from recent F1FO structures. Here, single-molecule F1FO rotation studies determined that the pKa values of the half-channels differ, show that mutations of residues in these channels change the pKa values of both half-channels, and reveal the ability of FO to undergo single c-subunit rotational stepping. These experiments provide evidence to support the hypothesis that proton translocation through FO operates via a Grotthuss mechanism involving a column of single water molecules in each half-channel linked by proton translocation-dependent c-ring rotation. We also observed pH-dependent 11° ATP synthase-direction sub-steps of the E. coli c10-ring of F1FO against the torque of F1-ATPase-dependent rotation that result from H+ transfer events from FO subunit-a groups with a low pKa to one c-subunit in the c-ring, and from an adjacent c-subunit to stator groups with a high pKa. These results support a mechanism in which alternating proton translocation-dependent 11° and 25° synthase-direction rotational sub-steps of the c10-ring occur to sustain F1FO ATP synthesis.

Data availability

All data generated or analyzed during this study are included in the manuscript and supporting files. Data source files for all figures have been uploaded to DRYAD and can be located at:doi:10.5061/dryad.9cnp5hqhw

The following data sets were generated

Article and author information

Author details

  1. Seiga Yanagisawa

    1School of Life Sciences, Arizona State University, Tempe, United States
    Competing interests
    The authors declare that no competing interests exist.
  2. Wayne D Frasch

    School of Life Sciences, Arizona State University, Tempe, United States
    For correspondence
    frasch@asu.edu
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-6590-7437

Funding

NIGMS (R01GM097510)

  • Wayne D Frasch

NSF (2119963)

  • Wayne D Frasch

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Copyright

© 2021, Yanagisawa & Frasch

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

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  1. Seiga Yanagisawa
  2. Wayne D Frasch
(2021)
pH-dependent 11° F1FO ATP synthase sub-steps reveal insight into the FO torque generating mechanism
eLife 10:e70016.
https://doi.org/10.7554/eLife.70016

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https://doi.org/10.7554/eLife.70016

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