The carboxyl-terminal sequence of PUMA binds to both anti-apoptotic proteins and membranes

  1. James M Pemberton
  2. Dang Nguyen
  3. Elizabeth J Osterlund
  4. Wiebke Schormann
  5. Justin P Pogmore
  6. Nehad Hirmiz
  7. Brian Leber
  8. David W Andrews  Is a corresponding author
  1. Sunnybrook Health Science Centre, Canada
  2. University of Toronto, Canada
  3. McMaster University, Canada

Abstract

Anti-apoptotic proteins such as BCL-XL promote cell survival by sequestering pro-apoptotic BCL-2 family members, an activity that frequently contributes to tumorigenesis. Thus, the development of small-molecule inhibitors for anti-apoptotic proteins, termed BH3-mimetics, is revolutionizing how we treat cancer. BH3 mimetics kill cells by displacing sequestered pro-apoptotic proteins to initiate tumor-cell death. Recent evidence has demonstrated that in live cells the BH3-only proteins PUMA and BIM resist displacement by BH3-mimetics, while others like tBID do not. Analysis of the molecular mechanism by which PUMA resists BH3-mimetic mediated displacement from full-length anti-apoptotic proteins (BCL-XL, BCL-2, BCL-W and MCL-1) reveals that both the BH3-motif and a novel binding site within the carboxyl-terminal sequence (CTS) of PUMA contribute to binding. Together these sequences bind to anti-apoptotic proteins, which effectively 'double-bolt locks' the proteins to resist BH3-mimetic displacement. The pro-apoptotic protein BIM has also been shown to double-bolt lock to anti-apoptotic proteins however, the novel binding sequence in PUMA is unrelated to that in the CTS of BIM and functions independent of PUMA binding to membranes. Moreover, contrary to previous reports, we find that when exogenously expressed, the CTS of PUMA directs the protein primarily to the endoplasmic reticulum (ER) rather than mitochondria and that residues I175 and P180 within the CTS are required for both ER localization and BH3-mimetic resistance. Understanding how PUMA resists BH3-mimetic displacement will be useful in designing more efficacious small-molecule inhibitors of anti-apoptotic BCL-2 proteins.

Data availability

We provide the MATLAB data analysis package on DataVerse (https://doi.org/10.5683/SP3/ZKXQW8)

Article and author information

Author details

  1. James M Pemberton

    Biological Sciences Platform, Sunnybrook Health Science Centre, Toronto, Canada
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-8386-1081
  2. Dang Nguyen

    Department of Medical Biophysics, University of Toronto, Toronto, Canada
    Competing interests
    The authors declare that no competing interests exist.
  3. Elizabeth J Osterlund

    Biological Sciences Platform, Sunnybrook Health Science Centre, Toronto, Canada
    Competing interests
    The authors declare that no competing interests exist.
  4. Wiebke Schormann

    Biological Sciences Platform, Sunnybrook Health Science Centre, Toronto, Canada
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-3055-2706
  5. Justin P Pogmore

    Biological Sciences Platform, Sunnybrook Health Science Centre, Toronto, Canada
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-4198-2779
  6. Nehad Hirmiz

    Biological Sciences Platform, Sunnybrook Health Science Centre, Toronto, Canada
    Competing interests
    The authors declare that no competing interests exist.
  7. Brian Leber

    Department of Medicine, McMaster University, Hamilton, Canada
    Competing interests
    The authors declare that no competing interests exist.
  8. David W Andrews

    Department of Medical Biophysics, University of Toronto, Toronto, Canada
    For correspondence
    david.andrews@sunnybrook.ca
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-9266-7157

Funding

Canadian Institutes of Health Research (FDN143312)

  • David W Andrews

Canada Research Chairs (Tier 1)

  • David W Andrews

Canada Foundation for Innovation

  • David W Andrews

Ontario Ministry of Research and Innovation

  • David W Andrews

CQDM

  • David W Andrews

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Copyright

© 2023, Pemberton et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

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  1. James M Pemberton
  2. Dang Nguyen
  3. Elizabeth J Osterlund
  4. Wiebke Schormann
  5. Justin P Pogmore
  6. Nehad Hirmiz
  7. Brian Leber
  8. David W Andrews
(2023)
The carboxyl-terminal sequence of PUMA binds to both anti-apoptotic proteins and membranes
eLife 12:e88329.
https://doi.org/10.7554/eLife.88329

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https://doi.org/10.7554/eLife.88329