Genetic reagent (Escherichia coli) | BL21 Rosetta DE3 pLYS | MilliporeSigma | Cat# 71403-3 | |
Cell line (Homo sapiens) | 293T-REx Flp-In | Invitrogen | Cat# R780-07;RRID:CVCL_U427 | |
Cell line (H. sapiens) | 293T-REx Flp-In: PTCH1-1D4 | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Cell line (H. sapiens) | 293T-REx Flp-In: PTCH1-ᐃL2-1D4 | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Cell line (H. sapiens) | 293T-REx Flp-In: PTCH1-1D4, D513Y | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Cell line (H. sapiens) | 293T-REx Flp-In: PTCH1-1D4, D513A/514 A | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Antibody | Anti-PTCH1(Rabbit polyclonal) | PMID:17641202 | | Dr. Rajat Rohatgi (Stanford University)WB (1:500) |
Antibody | Anti-RFP (Mouse monoclonal) | Thermo Fisher Scientific | Cat# MA5-15257; RRID:AB_10999796 | WB (1:2000) |
Antibody | Anti-P38(Rabbit polyclonal) | Abcam | Cat# ab7952; RRID: AB_306166 | WB (1:2000) |
Antibody | Anti-mouse IgG (H + L)(Peroxidase AffiniPure Donkey) | Jackson ImmunoResearch Laboratories | Cat# 715-035-150; RRID: AB_2340770 | WB (1:10,000) |
Antibody | Anti-rabbit IgG (H + L) (Peroxidase AffiniPure Donkey) | Jackson ImmunoResearch Laboratories | Cat# 111-035-144; RRID: AB_2307391 | WB (1:10,000) |
Recombinant DNA reagent | mNeon-ALOD4 in pRSETB (plasmid) | PMID:33712199 | | Dr. Arun Radhakrishnan (University of Texas, Southwestern Medical Center) |
Recombinant DNA reagent | mNeon-ALOD4- mutant in pRSETB (plasmid) | PMID:33712199 | | Dr. Arun Radhakrishnan (University of Texas, Southwestern Medical Center) |
Recombinant DNA reagent | pcDNA5-FRT-TO Flp-In (plasmid) | Thermo Fisher Scientific | Cat# V652020 | |
Recombinant DNA reagent | PTCH1-1D4 in pcDNA5-FRT-TO Flp-In (plasmid) | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Recombinant DNA reagent | dL2-PTCH1-1D4 in pcDNA5-FRT-TO Flp-In (plasmid) | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Recombinant DNA reagent | PTCH1-1D4, D513Y in pcDNA5-FRT-TO Flp-In (plasmid) | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Recombinant DNA reagent | PTCH1-1D4, D513A/D514A in pcDNA5-FRT-TO Flp-In (plasmid) | This paper | | Dr. Rajat Rohatgi (Stanford University) |
Recombinant DNA reagent | TdTomato-PFO-D4H in pGEX-6P1 (plasmid) | PMID:25663704 | | Dr. Gregory Fairn (University of Toronto) |
Recombinant DNA reagent | GFP-Gram1b in pEGFP-C1 (plasmid) | PMID:31724953 | | Dr. Yasunori Saheki (Nanyang Technological University, Singapore) |
Recombinant DNA reagent | POG44 Flp-Recombinase expression vector (plasmid) | Thermo Fisher Scientific | Cat# V600520 | |
Peptide, recombinant protein | Sonic Hedgehog | PMID:19561611 | | Dr. Christian Siebold (Oxford University) |
Chemical compound, drug | Methyl beta cyclodextrin | Sigma-Aldrich | Cat# C4555-5G | |
Chemical compound, drug | Myriocin | Cayman Chemicals | Cat# 35891-70-4 | |
Chemical compound, drug | Doxycycline | Sigma-Aldrich | Cat# D9891 | |
Chemical compound, drug | Monensin | Thermo Fisher Scientific | Cat# 461450010 | |
Chemical compound, drug | Nigericin | Sigma-Aldrich | Cat# 481990 | |
Chemical compound, drug | Dulbecco’s modified Eagle’s medium | Thermo Fisher Scientific | Cat# SH30081FS | |
Chemical compound, drug | Fetal bovine serum | Sigma-Aldrich | Cat# S11150 | |
Chemical compound, drug | Sodium pyruvate | Gibco | Cat# 11-360-070 | |
Chemical compound, drug | L-glutamine | Gemini Bio-products | Cat# 400106 | |
Chemical compound, drug | Penicillin/ streptomycin | Gemini Bio-products | Cat# 400109 | |
Chemical compound, drug | Nonessential amino acids | Gibco | Cat# 11140076 | |
Chemical compound, drug | Essential amino acids | Thermo Fisher Scientific | Cat# 11130051 | |
Chemical compound, drug | Vitamins | Thermo Fisher Scientific | Cat# 11120052 | |
Chemical compound, drug | Glucose | Thermo Fisher Scientific | Cat# A2494001 | |
Chemical compound, drug | HEPES | Lonza | Cat# 17-737E | |
Chemical compound, drug | Sodium pyruvate | Gibco | Cat# 11-360-070 | |
Chemical compound, drug | HT supplement | Thermo Fisher Scientific | Cat# 11067030 | |
Chemical compound, drug | Optimem | Thermo Fisher Scientific | Cat# 31985-070 | |
Chemical compound, drug | Polyethylenimine | Polysciences | Cat# 23966-1 | |
Chemical compound, drug | Matrigel | Thermo Fisher Scientific | Cat# CB-40234A | |
Chemical compound, drug | SigmaFast Protease inhibitor cocktail, EDTA-free | Sigma-Aldrich | Cat# S8830 | |
Chemical compound, drug | Hygromycin B | VWR Life Science | Cat# 97064-454 | |
Chemical compound, drug | Nikon Immersion Oil, Type NF 50 cc, nd = 1.515 (23°C) | Nikon | Cat# MXA22024 | |
Chemical compound, drug | Cesium chloride | Sigma-Aldrich | Cat# C4036 | |
Chemical compound, drug | Rubidium chloride | Sigma-Aldrich | Cat# R2252 | |
Chemical compound, drug | NMDG chloride | Sigma-Aldrich | Cat# 66,930 | |
Chemical compound, drug | Choline chloride | Research Products International | Cat# C41040 | |
Others | Chambered #1.5 German Coverglass, 8 well | Lab-Tek II | Cat# 155409 | |