Browse our latest Structural Biology and Molecular Biophysics articles

Page 58 of 186
    1. Neuroscience
    2. Structural Biology and Molecular Biophysics

    How clustered protocadherin binding specificity is tuned for neuronal self-/nonself-recognition

    Kerry Marie Goodman, Phinikoula S Katsamba ... Barry Honig
    Surface plasmon resonance studies reveal that clustered protocadherins have precisely tuned trans homophilic binding interactions and promiscuous but variable cis interactions, consistent with the requirement of forming error-free linear molecular zippers used by mammalian neurons to distinguish self from nonself.
    1. Structural Biology and Molecular Biophysics

    Cryo-EM structures reveal high-resolution mechanism of a DNA polymerase sliding clamp loader

    Christl Gaubitz, Xingchen Liu ... Brian A Kelch
    Cryo-EM structures of the eukaryotic clamp loader illustrate the large conformational changes that the clamp loader ATPase undergoes to open the circular sliding clamp and place it onto primer–template DNA.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    Structure and ion-release mechanism of PIB-4-type ATPases

    Christina Grønberg, Qiaoxia Hu ... Pontus Gourdon
    A biochemical approach unveils the overall shape of a subclass of heavy-metal transporting pumps, thereby shedding light on principle molecular determinants linked to the transport mechanism of these elusive machines, information that is critical well beyond basic science.
    1. Structural Biology and Molecular Biophysics

    Conformational decoupling in acid-sensing ion channels uncovers mechanism and stoichiometry of PcTx1-mediated inhibition

    Stephanie A Heusser, Christian B Borg ... Stephan A Pless
    A peptide toxin with therapeutic potential in stroke and pain induces multiple long-lasting conformational changes in acid-sensing ion channels and affects how the channels respond to endogenous ligands.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    Creation of photocyclic vertebrate rhodopsin by single amino acid substitution

    Kazumi Sakai, Yoshinori Shichida ... Takahiro Yamashita
    Through a single mutation at position 188, vertebrate rhodopsin acquires the ability to recover the dark state from the active state by a thermal reaction and by a photoreaction.
    1. Structural Biology and Molecular Biophysics

    Mg2+-dependent conformational equilibria in CorA and an integrated view on transport regulation

    Nicolai Tidemand Johansen, Marta Bonaccorsi ... Lise Arleth
    The Mg2+-channel CorA explores a wide conformational landscape of non-conducting states irrespective of bound Mg2+, but only in abscence of Mg2+, conducting states become accessible due to increased backbone dynamics.
    1. Physics of Living Systems
    2. Structural Biology and Molecular Biophysics

    An empirical energy landscape reveals mechanism of proteasome in polypeptide translocation

    Rui Fang, Jason Hon ... Ying Lu
    Empirical energy landscape allows simulating the structural dynamics of the proteasomal ATPase complex, which yields predictions that are widely consistent with experimental observations and reveals the functional mechanism of the proteasome in substrate degradation.
    1. Biochemistry and Chemical Biology
    2. Structural Biology and Molecular Biophysics

    Topoisomerase VI is a chirally-selective, preferential DNA decatenase

    Shannon J McKie, Parth Rakesh Desai ... Keir C Neuman
    Topoisomerase VI selectively catalyzes strand passage of DNA molecules juxtaposed at close to a right angle, which explains the observed chiral-dependent activity and preferential DNA decatenation versus supercoil relaxation.
    1. Structural Biology and Molecular Biophysics

    The MIDAS domain of AAA mechanoenzyme Mdn1 forms catch bonds with two different substrates

    Keith J Mickolajczyk, Paul Dominic B Olinares ... Tarun M Kapoor
    The MIDAS domain of Mdn1, an ATP-driven mechanoenzyme involved in ribosome biogenesis, forms catch bonds with two different ubiquitin-like domain-containing ribosomal assembly factors.
    1. Structural Biology and Molecular Biophysics

    Structure of the human ATM kinase and mechanism of Nbs1 binding

    Christopher Warren, Nikola P Pavletich
    Structures of the human ataxia-telangiectasia mutated (ATM) kinase alone and bound to the C-terminus of Nbs1 show the mechanisms underlying ATM autoinhibition and binding by a portion of the Mre11-Rad50-Nbs1 (MRN) activating complex.