Multicellularity: How contraction has shaped evolution

Two new unicellular organisms reveal that coordinated contractions of groups of cells using actomyosin predated animal multicellularity during evolution.
  1. Mukund Thattai  Is a corresponding author
  1. National Centre for Biological Sciences, Tata Institute of Fundamental Research, India

The Cheshire Cat in Alice’s Adventures in Wonderland is famous for its disappearing act: parts of its body vanish one by one until nothing remains but its ethereal grin. Scientists attempting to retrace the evolution of animals confront something equally curious. One might assume that going ever further back in evolutionary time, recently-evolved animal traits would drop away until a sort of ‘minimal animal’ remained. However, a growing body of data suggests that this minimal animal may not be an animal at all. Instead, sophisticated cellular processes once thought to be exclusive to animals are found across several unicellular eukaryotes: grins without (multicellular) cats!

So how do scientists reconstruct the deep history of multicellularity? The record for the oldest multicellular organism to be studied directly belongs to plants grown from 30,000-year-old seeds preserved in permafrost (Yashina et al., 2012). However, multicellular life is much older than this. Fossils of multicellular red algae have been dated to 1.6 billion years ago (Bengtson et al., 2017), and fossils of multicellular fungi date from about a billion years ago (Loron et al., 2019). The oldest confidently-dated animal fossils are about half a billion years old (Bobrovskiy et al., 2018). Multicellularity arose independently in plants, fungi and animals (Brunet and King, 2017). Scientists are interested in the unicellular ancestors of these groups because they want to know if each transition into multicellularity was driven by similar evolutionary forces. Unfortunately, fossils reveal little about the cell biology of these primordial organisms.

Darwin was well aware of this challenge. To reconstruct the evolutionary history of an organism, he wrote in On the Origin of Species, “we ought to look exclusively to its lineal ancestors; but this is scarcely ever possible and we are forced in each case to look to… the collateral descendants from the same original parent-form.” That is, one must hope the traits of surviving organisms reveal those of their extinct ancestors. Researchers now know that Darwin’s idea of “living fossils” was too simplistic. No organism remains entirely identical to its ancestor: genetic mutations constantly accumulate, driven by conflict, competition, and random chance. Nevertheless, one could hope to reconstruct the ancestor using a patchwork of different ancestral traits preserved across different surviving descendants.

A central theme of the emerging field of evolutionary cell biology is to study organisms that provide as much information as possible about the past. One way to do this is to develop new model organisms based on their position in the tree of life. As the evolution of animals is retraced, an ancestral unicellular species at the very threshold of multicellularity will eventually be reached. It is possible this species has no surviving descendants, other than the animals themselves. To find more collateral descendants, one must push further back in time. The better life’s existing diversity is sampled, the more likely that a species will be found similar to the ancestors scientists want to reconstruct.

The billion-year-old clade known as Holozoa consists of animals and closely related unicellular species, including choanoflagellates, filastereans, and ichthyosporeans. Just a decade ago this was a sparsely sampled region of the eukaryotic tree: for example, the first choanoflagellate genome was only published in 2008 (Brunet and King, 2017). Today dozens of holozoan species have been cultured, sequenced, and studied, and they are a fertile hunting ground for interesting cell biology. Importantly, the non-animal holozoans include species that can become transiently multicellular, at certain times or under certain conditions. Specifically, some choanoflagellates and ichthyosporeans have clonal multicellular life stages, while some filastereans form multicellular aggregates. But are these behaviors homologous to multicellularity in animals, and therefore representative of the ancestral state? Or are they examples of convergent evolution, driven by adaptations to similar environments?

One way to answer these questions is to resolve the molecular mechanisms that enable multicellular behavior across holozoans. Suggestively, holozoan genomes encode transcription factors and cell adhesion genes known to be essential for animal multicellularity, but the roles of these genes had not been directly demonstrated (Grau-Bové et al., 2017; Richter et al., 2018). Now, two independent teams have reported the results of studies on certain animal-like behaviors in unicellular lineages that shed light on the evolution of animal multicellularity (Figure 1).

Non-animal species in the clade Holozoa exhibit coordinated contractions dependent on actomyosin complexes similar to those observed in modern animals.

Phylogenetic tree of the Holozoa showing the position of animals (Metazoa), choanoflagellates (Choanoflagellata), filastereans (Filasterea) and ichthyosporeans (Ichthyosporea) within this clade (left). The choanoflagellates include Choanoeca flexa (top right), which has flagella that point inwards when the organism is in bright light. In the dark, the cells contract in a coordinated manner that causes the flagella to point outwards, a movement reminiscent of the contractions that cause tissues to curve during animal development (figure adapted from Brunet et al., 2019). The ichthyosporean Sphaeroforma arctica (bottom right) also exhibits actomyosin contractility, invaginating its membrane to generate multiple cells out of a polarized epithelial layer. This movement is comparable to processes that occur during embryonic development in flies (Dudin et al., 2019).

In a paper in eLife, Iñaki Ruiz-Trillo and co-workers from Barcelona, Liverpool, Oslo, Shizuoka and Hiroshima – including Omaya Dudin and Andrej Ondracka as joint first authors – report how reproduction in an ichthyosporean called Sphaeroforma arctica involves a stage of growth that is reminiscent of the embryonic development of fruit flies. The nucleus of an initial single cell divides repeatedly to form a polarized epithelial layer, which then gives rise to multiple cells as its membrane undergoes coordinated invaginations (Dudin et al., 2019).

In a second paper in Science, Nicole King and co-workers from Berkeley and Amsterdam – including Thibaut Brunet, Ben Larson and Tess Linden as joint first authors – report the results of a study on a newly isolated choanoflagellate which they name Choanoeca flexa (Brunet et al., 2019). In bright light this organism exists as a cup-shaped colony of cells, with their flagella pointing inwards. In the dark, however, the cup flips inside-out via a collective cellular contraction. This collective contraction is reminiscent of the contractions that generate curvature in developing animal tissues.

Both studies use imaging and pharmacological inhibition to demonstrate that these multicellular processes depend on the same molecular machinery: complexes of actin and myosin that can generate mechanical forces within cells. These results suggest that the last common ancestor of holozoans was an organism that was capable of transient multicellularity, with cells that could contract collectively. Among its descendants, only the animals evolved a permanently multicellular lifestyle, using the power of collective contraction to sculpt tissues and generate the “endless forms most beautiful” that so inspired Darwin.

References

Article and author information

Author details

  1. Mukund Thattai

    Mukund Thattai is in the Simons Centre for the Study of Living Machines, National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore, India

    For correspondence
    thattai@ncbs.res.in
    Competing interests
    No competing interests declared
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-2558-6517

Publication history

  1. Version of Record published: November 14, 2019 (version 1)

Copyright

© 2019, Thattai

This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 3,398
    views
  • 242
    downloads
  • 2
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Mukund Thattai
(2019)
Multicellularity: How contraction has shaped evolution
eLife 8:e52805.
https://doi.org/10.7554/eLife.52805

Further reading

    1. Cell Biology
    2. Neuroscience
    Marcos Moreno-Aguilera, Alba M Neher ... Carme Gallego
    Research Article Updated

    Alternative RNA splicing is an essential and dynamic process in neuronal differentiation and synapse maturation, and dysregulation of this process has been associated with neurodegenerative diseases. Recent studies have revealed the importance of RNA-binding proteins in the regulation of neuronal splicing programs. However, the molecular mechanisms involved in the control of these splicing regulators are still unclear. Here, we show that KIS, a kinase upregulated in the developmental brain, imposes a genome-wide alteration in exon usage during neuronal differentiation in mice. KIS contains a protein-recognition domain common to spliceosomal components and phosphorylates PTBP2, counteracting the role of this splicing factor in exon exclusion. At the molecular level, phosphorylation of unstructured domains within PTBP2 causes its dissociation from two co-regulators, Matrin3 and hnRNPM, and hinders the RNA-binding capability of the complex. Furthermore, KIS and PTBP2 display strong and opposing functional interactions in synaptic spine emergence and maturation. Taken together, our data uncover a post-translational control of splicing regulators that link transcriptional and alternative exon usage programs in neuronal development.

    1. Cell Biology
    Ang Li, Jianxun Yi ... Jingsong Zhou
    Research Article

    Amyotrophic lateral sclerosis (ALS) is a fatal neuromuscular disorder characterized by progressive weakness of almost all skeletal muscles, whereas extraocular muscles (EOMs) are comparatively spared. While hindlimb and diaphragm muscles of end-stage SOD1G93A (G93A) mice (a familial ALS mouse model) exhibit severe denervation and depletion of Pax7+satellite cells (SCs), we found that the pool of SCs and the integrity of neuromuscular junctions (NMJs) are maintained in EOMs. In cell sorting profiles, SCs derived from hindlimb and diaphragm muscles of G93A mice exhibit denervation-related activation, whereas SCs from EOMs of G93A mice display spontaneous (non-denervation-related) activation, similar to SCs from wild-type mice. Specifically, cultured EOM SCs contain more abundant transcripts of axon guidance molecules, including Cxcl12, along with more sustainable renewability than the diaphragm and hindlimb counterparts under differentiation pressure. In neuromuscular co-culture assays, AAV-delivery of Cxcl12 to G93A-hindlimb SC-derived myotubes enhances motor neuron axon extension and innervation, recapitulating the innervation capacity of EOM SC-derived myotubes. G93A mice fed with sodium butyrate (NaBu) supplementation exhibited less NMJ loss in hindlimb and diaphragm muscles. Additionally, SCs derived from G93A hindlimb and diaphragm muscles displayed elevated expression of Cxcl12 and improved renewability following NaBu treatment in vitro. Thus, the NaBu-induced transcriptomic changes resembling the patterns of EOM SCs may contribute to the beneficial effects observed in G93A mice. More broadly, the distinct transcriptomic profile of EOM SCs may offer novel therapeutic targets to slow progressive neuromuscular functional decay in ALS and provide possible ‘response biomarkers’ in pre-clinical and clinical studies.