Figure 8—figure supplement 1. | Epigenomic landscapes of retinal rods and cones

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Epigenomic landscapes of retinal rods and cones

Figure 8—figure supplement 1.

Affiliation details

Johns Hopkins University School of Medicine, United States; The Salk Institute for Biological Studies, United States; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, United States; Janelia Research Campus, Howard Hughes Medical Institute, United States; University of California San Diego, United States; The University of Western Australia, Australia; Johns Hopkins University, United States
Figure 8—figure supplement 1.
Download figureOpen in new tabFigure 8—figure supplement 1. Correlations of accessible chromatin among retinal and cortical samples.

(A) Heatmap showing pairwise Pearson correlation (r) for ATAC-seq and DNaseI-seq (D) read densities in 500 bp genomic bins among retinal and cortical samples. The dendrogram shows hierarchical clustering using 1 - r as the distance measure. (B) Heatmap showing the Jaccard index for ATAC-seq and DNaseI-seq (D) peaks among retinal and cortical samples. The dendrogram shows hierarchical clustering using 1 - Jaccard index as the distance measure. Biological replicates (R1, R2).

DOI: http://dx.doi.org/10.7554/eLife.11613.025