Impact of COVID-19-related disruptions to measles, meningococcal A, and yellow fever vaccination in 10 countries

  1. Katy A M Gaythorpe
  2. Kaja Abbas
  3. John Huber
  4. Andromachi Karachaliou
  5. Niket Thakkar
  6. Kim Woodruff
  7. Xiang Li
  8. Susy Echeverria-Londono
  9. VIMC Working Group on COVID-19 Impact on Vaccine Preventable Disease
  10. Matthew Ferrari
  11. Michael Jackson
  12. Kevin McCarthy
  13. T Alex Perkins
  14. Caroline Trotter
  15. Mark Jit  Is a corresponding author
  1. Imperial College London, Switzerland
  2. London School of Hygiene & Tropical Medicine, United Kingdom
  3. University of Notre Dame, France
  4. University of Cambridge, United Kingdom
  5. Institute for Disease Modelling, United States
  6. Imperial College London, United Kingdom
  7. Pennsylvania State University, United States
  8. Kaiser Permanente Washington,, United States
  9. University of Notre Dame, United States

Abstract

Background: Childhood immunisation services have been disrupted by COVID-19. WHO recommends considering outbreak risk using epidemiological criteria when deciding whether to conduct preventive vaccination campaigns during the pandemic.

Methods: We used 2-3 models per infection to estimate the health impact of 50% reduced routine vaccination coverage and delaying campaign vaccination for measles, meningococcal A and yellow fever vaccination in 3-6 high burden countries per infection.

Results: Reduced routine coverage in 2020 without catch-up vaccination may increase measles and yellow fever disease burden in the modelled countries. Delaying planned campaigns may lead to measles outbreaks and increases in yellow fever burden in some countries. For meningococcal A vaccination, short term disruptions in 2020 are unlikely to have a significant impact.

Conclusion: The impact of COVID-19-related disruption to vaccination programs varies between infections and countries.

Funding: Bill and Melinda Gates Foundation and Gavi, the Vaccine Alliance.

Data availability

All code, data inputs and outputs used to generate the results in the manuscript (apart from projections about vaccine coverage beyond 2020 which are commercially confidential property of Gavi) are available at: https://github.com/vimc/vpd-covid-phase-I.

Article and author information

Author details

  1. Katy A M Gaythorpe

    MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, Imperial College London, London, Switzerland
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0003-3734-9081
  2. Kaja Abbas

    Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
    Competing interests
    No competing interests declared.
  3. John Huber

    University of Notre Dame, Notre Dame, France
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-5245-5187
  4. Andromachi Karachaliou

    Department of Vetinary Medicine, University of Cambridge, Cambridge, United Kingdom
    Competing interests
    No competing interests declared.
  5. Niket Thakkar

    Institute for Disease Modelling, Institute for Disease Modelling, Seattle, United States
    Competing interests
    Niket Thakkar, KM is an employee of the Institute for Disease Modeling at the Bill & Melinda Gates Foundation, which funded the research..
  6. Kim Woodruff

    MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
    Competing interests
    No competing interests declared.
  7. Xiang Li

    MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
    Competing interests
    No competing interests declared.
  8. Susy Echeverria-Londono

    MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
    Competing interests
    No competing interests declared.
  9. VIMC Working Group on COVID-19 Impact on Vaccine Preventable Disease

  10. Matthew Ferrari

    Department of Biology, Pennsylvania State University, University Park, United States
    Competing interests
    No competing interests declared.
  11. Michael Jackson

    Kaiser Permanente Washington,, Seattle, United States
    Competing interests
    Michael Jackson, KM is an employee of the Institute for Disease Modeling at the Bill & Melinda Gates Foundation, which funded the research..
  12. Kevin McCarthy

    Institute for Disease Modelling, Institute for Disease Modelling, Seattle, United States
    Competing interests
    No competing interests declared.
  13. T Alex Perkins

    University of Notre Dame, Notre Dame, United States
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-7518-4014
  14. Caroline Trotter

    Department of Vetinary Medicine, University of Cambridge, Cambridge, United Kingdom
    Competing interests
    Caroline Trotter, CT declares a consultancy fee from GSK in 2018 (unrelated to the submitted work)..
  15. Mark Jit

    Department of Infectious Disease Epidemiology, London School of Hygiene & Tropical Medicine, London, United Kingdom
    For correspondence
    Mark.Jit@lshtm.ac.uk
    Competing interests
    Mark Jit, Reviewing editor, eLife.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0001-6658-8255

Funding

Gavi, the Vaccine Alliance and the Bill & Melinda Gates Foundation (OPP1157270 and INV-016832)

  • Katy A M Gaythorpe
  • Kaja Abbas
  • John Huber
  • Andromachi Karachaliou
  • Niket Thakkar
  • Kim Woodruff
  • Xiang Li
  • Susy Echeverria-Londono
  • Matthew Ferrari
  • Michael Jackson
  • Kevin McCarthy
  • Alex T Perkins
  • Caroline Trotter
  • Mark Jit

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Copyright

© 2021, Gaythorpe et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 2,881
    views
  • 385
    downloads
  • 56
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Katy A M Gaythorpe
  2. Kaja Abbas
  3. John Huber
  4. Andromachi Karachaliou
  5. Niket Thakkar
  6. Kim Woodruff
  7. Xiang Li
  8. Susy Echeverria-Londono
  9. VIMC Working Group on COVID-19 Impact on Vaccine Preventable Disease
  10. Matthew Ferrari
  11. Michael Jackson
  12. Kevin McCarthy
  13. T Alex Perkins
  14. Caroline Trotter
  15. Mark Jit
(2021)
Impact of COVID-19-related disruptions to measles, meningococcal A, and yellow fever vaccination in 10 countries
eLife 10:e67023.
https://doi.org/10.7554/eLife.67023

Share this article

https://doi.org/10.7554/eLife.67023

Further reading

    1. Epidemiology and Global Health
    Marina Padilha, Victor Nahuel Keller ... Gilberto Kac
    Research Article

    Background: The role of circulating metabolites on child development is understudied. We investigated associations between children's serum metabolome and early childhood development (ECD).

    Methods: Untargeted metabolomics was performed on serum samples of 5,004 children aged 6-59 months, a subset of participants from the Brazilian National Survey on Child Nutrition (ENANI-2019). ECD was assessed using the Survey of Well-being of Young Children's milestones questionnaire. The graded response model was used to estimate developmental age. Developmental quotient (DQ) was calculated as the developmental age divided by chronological age. Partial least square regression selected metabolites with a variable importance projection ≥ 1. The interaction between significant metabolites and the child's age was tested.

    Results: Twenty-eight top-ranked metabolites were included in linear regression models adjusted for the child's nutritional status, diet quality, and infant age. Cresol sulfate (β = -0.07; adjusted-p < 0.001), hippuric acid (β = -0.06; adjusted-p < 0.001), phenylacetylglutamine (β = -0.06; adjusted-p < 0.001), and trimethylamine-N-oxide (β = -0.05; adjusted-p = 0.002) showed inverse associations with DQ. We observed opposite directions in the association of DQ for creatinine (for children aged -1 SD: β = -0.05; p =0.01; +1 SD: β = 0.05; p =0.02) and methylhistidine (-1 SD: β = - 0.04; p =0.04; +1 SD: β = 0.04; p =0.03).

    Conclusion: Serum biomarkers, including dietary and microbial-derived metabolites involved in the gut-brain axis, may potentially be used to track children at risk for developmental delays.

    Funding: Supported by the Brazilian Ministry of Health and the Brazilian National Research Council.

    1. Epidemiology and Global Health
    Riccardo Spott, Mathias W Pletz ... Christian Brandt
    Research Article

    Given the rapid cross-country spread of SARS-CoV-2 and the resulting difficulty in tracking lineage spread, we investigated the potential of combining mobile service data and fine-granular metadata (such as postal codes and genomic data) to advance integrated genomic surveillance of the pandemic in the federal state of Thuringia, Germany. We sequenced over 6500 SARS-CoV-2 Alpha genomes (B.1.1.7) across 7 months within Thuringia while collecting patients’ isolation dates and postal codes. Our dataset is complemented by over 66,000 publicly available German Alpha genomes and mobile service data for Thuringia. We identified the existence and spread of nine persistent mutation variants within the Alpha lineage, seven of which formed separate phylogenetic clusters with different spreading patterns in Thuringia. The remaining two are subclusters. Mobile service data can indicate these clusters’ spread and highlight a potential sampling bias, especially of low-prevalence variants. Thereby, mobile service data can be used either retrospectively to assess surveillance coverage and efficiency from already collected data or to actively guide part of a surveillance sampling process to districts where these variants are expected to emerge. The latter concept was successfully implemented as a proof-of-concept for a mobility-guided sampling strategy in response to the surveillance of Omicron sublineage BQ.1.1. The combination of mobile service data and SARS-CoV-2 surveillance by genome sequencing is a valuable tool for more targeted and responsive surveillance.