Figure 2—figure supplement 1. | Epigenomic landscapes of retinal rods and cones

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Epigenomic landscapes of retinal rods and cones

Figure 2—figure supplement 1.

Affiliation details

Johns Hopkins University School of Medicine, United States; The Salk Institute for Biological Studies, United States; Howard Hughes Medical Institute, The Salk Institute for Biological Studies, United States; Janelia Research Campus, Howard Hughes Medical Institute, United States; University of California San Diego, United States; The University of Western Australia, Australia; Johns Hopkins University, United States
Figure 2—figure supplement 1.
Download figureOpen in new tabFigure 2—figure supplement 1. Rod versus cone DNA methylation levels at DMRs are strongly anti-correlated with relative gene expression.

Relative gene expression (log2(Rod/Cone) RNA TPM) has a stronger magnitude of correlation with DNA methylation levels at DMRs (black line), than with either ATAC-seq signals at differential ATAC-seq peaks (red line) or mean mCG levels in 1 kb genomic bins (blue line).

DOI: http://dx.doi.org/10.7554/eLife.11613.007