Figure 3—figure supplement 4. | Admixture into and within sub-Saharan Africa

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Admixture into and within sub-Saharan Africa

Figure 3—figure supplement 4.

Affiliation details

Wellcome Trust Centre for Human Genetics, United Kingdom; Wellcome Trust Sanger Institute, United Kingdom; Medical Research Council Unit, The Gambia; Royal Victoria Teaching Hospital, The Gambia; Centre National de Recherche et de Formation sur le Paludisme, Burkina Faso; University of Rome La Sapienza, Italy; Navrongo Health Research Centre, Ghana; Komfo Anokye Teaching Hospital, Ghana; University of Buea, Cameroon; KEMRI-Wellcome Trust Research Programme, Kenya; Kilimanjaro Christian Medical College, Tanzania; London School of Hygiene and Tropical Medicine, United Kingdom; College of Medicine, University of Malawi, Malawi; University of Bamako, Mali
Figure 3—figure supplement 4.
Download figureOpen in new tabFigure 3—figure supplement 4. Comparison of the minimum distance to begin computing admixture LD split by region.

As in Figure 3—figure supplement 3 except distances are stratified by region. The median minimum distance that all sub-Saharan African populations have correlated LD is always greater than 0.5cM. Taken together with the results described in Figure 3—figure supplement 4, this suggests that all African populations share some LD over short genetic distances, that may be the result of shared demography or admixture. (Note that ALDER computes LD correlations at distances <2cM.)

DOI: http://dx.doi.org/10.7554/eLife.15266.022