Browse our latest Computational and Systems Biology articles

Page 17 of 115
    1. Computational and Systems Biology

    The genetic and dietary landscape of the muscle insulin signalling network

    Julian van Gerwen, Stewart WC Masson ... David E James
    Genetic background and dietary environment interact to reshape metabolic signalling networks, and the resulting signalling diversity can illuminate regulatory mechanisms of complex traits.
    1. Computational and Systems Biology
    2. Immunology and Inflammation

    A kinase to cytokine explorer to identify molecular regulators and potential therapeutic opportunities

    Marina Chan, Yuqi Kang ... Taranjit S Gujral
    KinCytE is a web-based platform that explores kinase-cytokine-driven signaling and its relevance to understanding and treating diseases linked to disruptions in these pathways.
    1. Computational and Systems Biology

    Affected cell types for hundreds of Mendelian diseases revealed by analysis of human and mouse single-cell data

    Idan Hekselman, Assaf Vital ... Esti Yeger-Lotem
    The PrEDiCT scheme infers disease-affected cell types from the expression of disease-associated genes in single-cell expression atlases, thereby providing cellular context and enhancing mechanistic understanding for 328 Mendelian diseases.
    1. Computational and Systems Biology

    Detection of new pioneer transcription factors as cell-type-specific nucleosome binders

    Yunhui Peng, Wei Song ... Anna R Panchenko
    A computational method has been developed for predicting the cell-type-specific binding of transcription factors to nucleosomes, and involves integration of ChIP-seq, MNase-seq, and DNase-seq data with details of nucleosome structure.
    1. Neuroscience
    2. Computational and Systems Biology

    Gain neuromodulation mediates perceptual switches: evidence from pupillometry, fMRI, and RNN Modelling

    Gabriel Wainstein, Christopher J. Whyte ... James M. Shine
    Not revised
    Reviewed Preprint v1
    1. Computational and Systems Biology
    2. Physics of Living Systems

    Exploiting fluctuations in gene expression to detect causal interactions between genes

    Euan Joly-Smith, Mir Mikdad Talpur ... Andreas Hilfinger
    Not revised
    Reviewed Preprint v1
    1. Computational and Systems Biology
    2. Physics of Living Systems

    Insulin Release: Synchronizing beta cells in the pancreas

    Bradford E Peercy, David J Hodson
    The secretion of insulin from the pancreas relies on both gap junctions and subpopulations of beta cells with specific intrinsic properties.
    Version of Record
    Insight
    1. Computational and Systems Biology
    2. Genetics and Genomics

    Comparative interactome analysis of α-arrestin families in human and Drosophila

    Kyung-Tae Lee, Inez KA Pranoto ... Jin-Wu Nam
    Unveiling the high-confidence protein–protein interaction networks of human and fly α-arrestins provides insights into conserved and species-specific functional roles depending on their protein domains and motifs.
    1. Computational and Systems Biology
    2. Microbiology and Infectious Disease

    Light-inducible protein degradation in E. coli with the LOVdeg tag

    Nathan Tague, Cristian Coriano-Ortiz ... Mary J Dunlop
    The LOVdeg tag is a versatile tool for bacterial optogenetics, offering modular, blue light-inducible protein degradation for a range of synthetic biology and metabolic engineering applications.