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Page 2 of 116
Genetics and Genomics
Evolutionary Biology
The causes and consequences of human-specific DNA methylation
Zhenzhen Ma, Alexander L Starr ... Hunter B Fraser
Evolutionary Biology
Inference of germinal center evolutionary dynamics via simulation-based deep learning
Duncan K Ralph, Athanasios G Bakis ... Frederick A Matsen
Deep learning applied to B cell phylogenies reveals a simple, measurable curve relating receptor affinity to evolutionary fitness in germinal centers.
Evolutionary Biology
Pervasive relaxed selection on spermatogenesis genes coincident with the evolution of polygyny in gorillas
Jacob Bowman, Neide Silva ... Vincent J Lynch
Ecology
Evolutionary Biology
Evolution of sideways locomotion in crabs
Junya Taniguchi, Tsubasa Inoue ... Yuuki Kawabata
Developmental Biology
Evolutionary Biology
The endoderm cell trajectory of urochordate
Styela clava
reveals the dual developmental origin and evolution of digestive tract
Yonghang Ge, Wei Zhang ... Jiankai Wei
Evolutionary Biology
New insights into the evolution of spider silk proteins illuminated by long-read transcriptomes
Kesen Zhu, Shiyi Zhou ... Hui Xiang
Evolutionary Biology
Immunology and Inflammation
Antibody Language Models: Taking the biology seriously makes models better
Antonio Matas-Gil, Andreas Tiffeau-Mayer
A new biologically-informed training paradigm enables protein language models to predict affinity maturation trajectories for antibodies.
Neuroscience
Evolutionary Biology
Three-dimensional and molecular brain atlas of the hagfish reveals the evolutionary origin and early diversification of the vertebrate brain
Riho Harada, Motoki Tamura ... Daichi G Suzuki
Evolutionary Biology
Design and experimental characterization of specificity-switching mutational paths of WW domains
Ahmed Rehan, Eugenio Mauri ... Simona Cocco
Evolutionary Biology
The adaptive landscapes of three global
Escherichia coli
transcriptional regulators
Cauã Antunes Westmann, Leander Goldbach, Andreas Wagner
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